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Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia

Although miRNA markers have been identified for the pathological development of gastric adenocarcinoma (GAC), the underlying molecule mechanism are still not fully understood. Moreover, some gastric adenoma/dysplasia may progress to GAC. In this study, the miRNA expression profiles in normal and pai...

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Autores principales: Kim, Yu Jin, Hwang, Ki-Chul, Kim, Sang Woo, Lee, Yong Chan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5930463/
https://www.ncbi.nlm.nih.gov/pubmed/29725252
http://dx.doi.org/10.7150/ijms.24061
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author Kim, Yu Jin
Hwang, Ki-Chul
Kim, Sang Woo
Lee, Yong Chan
author_facet Kim, Yu Jin
Hwang, Ki-Chul
Kim, Sang Woo
Lee, Yong Chan
author_sort Kim, Yu Jin
collection PubMed
description Although miRNA markers have been identified for the pathological development of gastric adenocarcinoma (GAC), the underlying molecule mechanism are still not fully understood. Moreover, some gastric adenoma/dysplasia may progress to GAC. In this study, the miRNA expression profiles in normal and paired low-/high-grade dysplasia were analyzed using Affymetrix Gene-Chip miRNA arrays. Of the total 2578 mature miRNA probe sets, ~1600 showed positive signals when the between normal and paired low-/high-grade dysplasia were compared. To verify the miRNA expression, qRT-PCR analysis was performed to quantify the expression of altered miRNAs between normal and paired low-/high-grade dysplasia. The analysis revealed that hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p were overexpressed in gastric low-/high-grade dysplasia and that based on these miRNA-target interactions, FBXO11 and CREBZF could be considered convincing markers for gastric cancer (GC) progression. Thus, we identified three miRNAs (hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p) with two mRNAs (FBXO11 and CREBZF) that might play an important role in the GC development from premalignant adenomas. Furthermore, these two target mRNAs and three miRNAs were predicted to be potential biomarkers for the progression of GC by miRNA-target interaction analysis.
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spelling pubmed-59304632018-05-03 Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia Kim, Yu Jin Hwang, Ki-Chul Kim, Sang Woo Lee, Yong Chan Int J Med Sci Research Paper Although miRNA markers have been identified for the pathological development of gastric adenocarcinoma (GAC), the underlying molecule mechanism are still not fully understood. Moreover, some gastric adenoma/dysplasia may progress to GAC. In this study, the miRNA expression profiles in normal and paired low-/high-grade dysplasia were analyzed using Affymetrix Gene-Chip miRNA arrays. Of the total 2578 mature miRNA probe sets, ~1600 showed positive signals when the between normal and paired low-/high-grade dysplasia were compared. To verify the miRNA expression, qRT-PCR analysis was performed to quantify the expression of altered miRNAs between normal and paired low-/high-grade dysplasia. The analysis revealed that hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p were overexpressed in gastric low-/high-grade dysplasia and that based on these miRNA-target interactions, FBXO11 and CREBZF could be considered convincing markers for gastric cancer (GC) progression. Thus, we identified three miRNAs (hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p) with two mRNAs (FBXO11 and CREBZF) that might play an important role in the GC development from premalignant adenomas. Furthermore, these two target mRNAs and three miRNAs were predicted to be potential biomarkers for the progression of GC by miRNA-target interaction analysis. Ivyspring International Publisher 2018-03-14 /pmc/articles/PMC5930463/ /pubmed/29725252 http://dx.doi.org/10.7150/ijms.24061 Text en © Ivyspring International Publisher This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY-NC) license (https://creativecommons.org/licenses/by-nc/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Kim, Yu Jin
Hwang, Ki-Chul
Kim, Sang Woo
Lee, Yong Chan
Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
title Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
title_full Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
title_fullStr Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
title_full_unstemmed Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
title_short Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
title_sort potential mirna-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5930463/
https://www.ncbi.nlm.nih.gov/pubmed/29725252
http://dx.doi.org/10.7150/ijms.24061
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