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Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia
Although miRNA markers have been identified for the pathological development of gastric adenocarcinoma (GAC), the underlying molecule mechanism are still not fully understood. Moreover, some gastric adenoma/dysplasia may progress to GAC. In this study, the miRNA expression profiles in normal and pai...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5930463/ https://www.ncbi.nlm.nih.gov/pubmed/29725252 http://dx.doi.org/10.7150/ijms.24061 |
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author | Kim, Yu Jin Hwang, Ki-Chul Kim, Sang Woo Lee, Yong Chan |
author_facet | Kim, Yu Jin Hwang, Ki-Chul Kim, Sang Woo Lee, Yong Chan |
author_sort | Kim, Yu Jin |
collection | PubMed |
description | Although miRNA markers have been identified for the pathological development of gastric adenocarcinoma (GAC), the underlying molecule mechanism are still not fully understood. Moreover, some gastric adenoma/dysplasia may progress to GAC. In this study, the miRNA expression profiles in normal and paired low-/high-grade dysplasia were analyzed using Affymetrix Gene-Chip miRNA arrays. Of the total 2578 mature miRNA probe sets, ~1600 showed positive signals when the between normal and paired low-/high-grade dysplasia were compared. To verify the miRNA expression, qRT-PCR analysis was performed to quantify the expression of altered miRNAs between normal and paired low-/high-grade dysplasia. The analysis revealed that hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p were overexpressed in gastric low-/high-grade dysplasia and that based on these miRNA-target interactions, FBXO11 and CREBZF could be considered convincing markers for gastric cancer (GC) progression. Thus, we identified three miRNAs (hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p) with two mRNAs (FBXO11 and CREBZF) that might play an important role in the GC development from premalignant adenomas. Furthermore, these two target mRNAs and three miRNAs were predicted to be potential biomarkers for the progression of GC by miRNA-target interaction analysis. |
format | Online Article Text |
id | pubmed-5930463 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-59304632018-05-03 Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia Kim, Yu Jin Hwang, Ki-Chul Kim, Sang Woo Lee, Yong Chan Int J Med Sci Research Paper Although miRNA markers have been identified for the pathological development of gastric adenocarcinoma (GAC), the underlying molecule mechanism are still not fully understood. Moreover, some gastric adenoma/dysplasia may progress to GAC. In this study, the miRNA expression profiles in normal and paired low-/high-grade dysplasia were analyzed using Affymetrix Gene-Chip miRNA arrays. Of the total 2578 mature miRNA probe sets, ~1600 showed positive signals when the between normal and paired low-/high-grade dysplasia were compared. To verify the miRNA expression, qRT-PCR analysis was performed to quantify the expression of altered miRNAs between normal and paired low-/high-grade dysplasia. The analysis revealed that hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p were overexpressed in gastric low-/high-grade dysplasia and that based on these miRNA-target interactions, FBXO11 and CREBZF could be considered convincing markers for gastric cancer (GC) progression. Thus, we identified three miRNAs (hsa-miR-421, hsa-miR-29b-1-5p, and hsa-miR-27b-5p) with two mRNAs (FBXO11 and CREBZF) that might play an important role in the GC development from premalignant adenomas. Furthermore, these two target mRNAs and three miRNAs were predicted to be potential biomarkers for the progression of GC by miRNA-target interaction analysis. Ivyspring International Publisher 2018-03-14 /pmc/articles/PMC5930463/ /pubmed/29725252 http://dx.doi.org/10.7150/ijms.24061 Text en © Ivyspring International Publisher This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY-NC) license (https://creativecommons.org/licenses/by-nc/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Kim, Yu Jin Hwang, Ki-Chul Kim, Sang Woo Lee, Yong Chan Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia |
title | Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia |
title_full | Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia |
title_fullStr | Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia |
title_full_unstemmed | Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia |
title_short | Potential miRNA-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia |
title_sort | potential mirna-target interactions for the screening of gastric carcinoma development in gastric adenoma/dysplasia |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5930463/ https://www.ncbi.nlm.nih.gov/pubmed/29725252 http://dx.doi.org/10.7150/ijms.24061 |
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