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The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence
In mature soils, plant species and soil type determine the selection of root microbiota. Which of these two factors drives rhizosphere selection in barren substrates of developing desert soils has, however, not yet been established. Chronosequences of glacier forelands provide ideal natural environm...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5931989/ https://www.ncbi.nlm.nih.gov/pubmed/29335640 http://dx.doi.org/10.1038/s41396-017-0026-4 |
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author | Mapelli, Francesca Marasco, Ramona Fusi, Marco Scaglia, Barbara Tsiamis, George Rolli, Eleonora Fodelianakis, Stilianos Bourtzis, Kostas Ventura, Stefano Tambone, Fulvia Adani, Fabrizio Borin, Sara Daffonchio, Daniele |
author_facet | Mapelli, Francesca Marasco, Ramona Fusi, Marco Scaglia, Barbara Tsiamis, George Rolli, Eleonora Fodelianakis, Stilianos Bourtzis, Kostas Ventura, Stefano Tambone, Fulvia Adani, Fabrizio Borin, Sara Daffonchio, Daniele |
author_sort | Mapelli, Francesca |
collection | PubMed |
description | In mature soils, plant species and soil type determine the selection of root microbiota. Which of these two factors drives rhizosphere selection in barren substrates of developing desert soils has, however, not yet been established. Chronosequences of glacier forelands provide ideal natural environments to identify primary rhizosphere selection factors along the changing edaphic conditions of a developing soil. Here, we analyze changes in bacterial diversity in bulk soils and rhizospheres of a pioneer plant across a High Arctic glacier chronosequence. We show that the developmental stage of soil strongly modulates rhizosphere community assembly, even though plant-induced selection buffers the effect of changing edaphic factors. Bulk and rhizosphere soils host distinct bacterial communities that differentially vary along the chronosequence. Cation exchange capacity, exchangeable potassium, and metabolite concentration in the soil account for the rhizosphere bacterial diversity. Although the soil fraction (bulk soil and rhizosphere) explains up to 17.2% of the variation in bacterial microbiota, the soil developmental stage explains up to 47.7% of this variation. In addition, the operational taxonomic unit (OTU) co-occurrence network of the rhizosphere, whose complexity increases along the chronosequence, is loosely structured in barren compared with mature soils, corroborating our hypothesis that soil development tunes the rhizosphere effect. |
format | Online Article Text |
id | pubmed-5931989 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-59319892018-06-20 The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence Mapelli, Francesca Marasco, Ramona Fusi, Marco Scaglia, Barbara Tsiamis, George Rolli, Eleonora Fodelianakis, Stilianos Bourtzis, Kostas Ventura, Stefano Tambone, Fulvia Adani, Fabrizio Borin, Sara Daffonchio, Daniele ISME J Article In mature soils, plant species and soil type determine the selection of root microbiota. Which of these two factors drives rhizosphere selection in barren substrates of developing desert soils has, however, not yet been established. Chronosequences of glacier forelands provide ideal natural environments to identify primary rhizosphere selection factors along the changing edaphic conditions of a developing soil. Here, we analyze changes in bacterial diversity in bulk soils and rhizospheres of a pioneer plant across a High Arctic glacier chronosequence. We show that the developmental stage of soil strongly modulates rhizosphere community assembly, even though plant-induced selection buffers the effect of changing edaphic factors. Bulk and rhizosphere soils host distinct bacterial communities that differentially vary along the chronosequence. Cation exchange capacity, exchangeable potassium, and metabolite concentration in the soil account for the rhizosphere bacterial diversity. Although the soil fraction (bulk soil and rhizosphere) explains up to 17.2% of the variation in bacterial microbiota, the soil developmental stage explains up to 47.7% of this variation. In addition, the operational taxonomic unit (OTU) co-occurrence network of the rhizosphere, whose complexity increases along the chronosequence, is loosely structured in barren compared with mature soils, corroborating our hypothesis that soil development tunes the rhizosphere effect. Nature Publishing Group UK 2018-01-15 2018-05 /pmc/articles/PMC5931989/ /pubmed/29335640 http://dx.doi.org/10.1038/s41396-017-0026-4 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Mapelli, Francesca Marasco, Ramona Fusi, Marco Scaglia, Barbara Tsiamis, George Rolli, Eleonora Fodelianakis, Stilianos Bourtzis, Kostas Ventura, Stefano Tambone, Fulvia Adani, Fabrizio Borin, Sara Daffonchio, Daniele The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence |
title | The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence |
title_full | The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence |
title_fullStr | The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence |
title_full_unstemmed | The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence |
title_short | The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence |
title_sort | stage of soil development modulates rhizosphere effect along a high arctic desert chronosequence |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5931989/ https://www.ncbi.nlm.nih.gov/pubmed/29335640 http://dx.doi.org/10.1038/s41396-017-0026-4 |
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