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Hackathons as a means of accelerating scientific discoveries and knowledge transfer
Scientific research plays a key role in the advancement of human knowledge and pursuit of solutions to important societal challenges. Typically, research occurs within specific institutions where data are generated and subsequently analyzed. Although collaborative science bringing together multiple...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5932615/ https://www.ncbi.nlm.nih.gov/pubmed/29650552 http://dx.doi.org/10.1101/gr.228460.117 |
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author | Ghouila, Amel Siwo, Geoffrey Henry Entfellner, Jean-Baka Domelevo Panji, Sumir Button-Simons, Katrina A. Davis, Sage Zenon Fadlelmola, Faisal M. Ferdig, Michael T. Mulder, Nicola |
author_facet | Ghouila, Amel Siwo, Geoffrey Henry Entfellner, Jean-Baka Domelevo Panji, Sumir Button-Simons, Katrina A. Davis, Sage Zenon Fadlelmola, Faisal M. Ferdig, Michael T. Mulder, Nicola |
author_sort | Ghouila, Amel |
collection | PubMed |
description | Scientific research plays a key role in the advancement of human knowledge and pursuit of solutions to important societal challenges. Typically, research occurs within specific institutions where data are generated and subsequently analyzed. Although collaborative science bringing together multiple institutions is now common, in such collaborations the analytical processing of the data is often performed by individual researchers within the team, with only limited internal oversight and critical analysis of the workflow prior to publication. Here, we show how hackathons can be a means of enhancing collaborative science by enabling peer review before results of analyses are published by cross-validating the design of studies or underlying data sets and by driving reproducibility of scientific analyses. Traditionally, in data analysis processes, data generators and bioinformaticians are divided and do not collaborate on analyzing the data. Hackathons are a good strategy to build bridges over the traditional divide and are potentially a great agile extension to the more structured collaborations between multiple investigators and institutions. |
format | Online Article Text |
id | pubmed-5932615 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Cold Spring Harbor Laboratory Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-59326152018-05-31 Hackathons as a means of accelerating scientific discoveries and knowledge transfer Ghouila, Amel Siwo, Geoffrey Henry Entfellner, Jean-Baka Domelevo Panji, Sumir Button-Simons, Katrina A. Davis, Sage Zenon Fadlelmola, Faisal M. Ferdig, Michael T. Mulder, Nicola Genome Res Resource Scientific research plays a key role in the advancement of human knowledge and pursuit of solutions to important societal challenges. Typically, research occurs within specific institutions where data are generated and subsequently analyzed. Although collaborative science bringing together multiple institutions is now common, in such collaborations the analytical processing of the data is often performed by individual researchers within the team, with only limited internal oversight and critical analysis of the workflow prior to publication. Here, we show how hackathons can be a means of enhancing collaborative science by enabling peer review before results of analyses are published by cross-validating the design of studies or underlying data sets and by driving reproducibility of scientific analyses. Traditionally, in data analysis processes, data generators and bioinformaticians are divided and do not collaborate on analyzing the data. Hackathons are a good strategy to build bridges over the traditional divide and are potentially a great agile extension to the more structured collaborations between multiple investigators and institutions. Cold Spring Harbor Laboratory Press 2018-05 /pmc/articles/PMC5932615/ /pubmed/29650552 http://dx.doi.org/10.1101/gr.228460.117 Text en © 2018 Ghouila et al.; Published by Cold Spring Harbor Laboratory Press http://creativecommons.org/licenses/by/4.0/ This article, published in Genome Research, is available under a Creative Commons License (Attribution 4.0 International), as described at http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Resource Ghouila, Amel Siwo, Geoffrey Henry Entfellner, Jean-Baka Domelevo Panji, Sumir Button-Simons, Katrina A. Davis, Sage Zenon Fadlelmola, Faisal M. Ferdig, Michael T. Mulder, Nicola Hackathons as a means of accelerating scientific discoveries and knowledge transfer |
title | Hackathons as a means of accelerating scientific discoveries and knowledge transfer |
title_full | Hackathons as a means of accelerating scientific discoveries and knowledge transfer |
title_fullStr | Hackathons as a means of accelerating scientific discoveries and knowledge transfer |
title_full_unstemmed | Hackathons as a means of accelerating scientific discoveries and knowledge transfer |
title_short | Hackathons as a means of accelerating scientific discoveries and knowledge transfer |
title_sort | hackathons as a means of accelerating scientific discoveries and knowledge transfer |
topic | Resource |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5932615/ https://www.ncbi.nlm.nih.gov/pubmed/29650552 http://dx.doi.org/10.1101/gr.228460.117 |
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