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A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus

LysR-type transcriptional regulators (LTTRs) contain an N-terminal DNA binding domain (DBD) and a C-terminal regulatory domain (RD). Typically, LTTRs function as homotetramers. VV2_1132 was identified in Vibrio vulnificus as an LTTR that is a homologue of HypT (also known as YjiE or QseD) in Escheri...

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Autores principales: Jang, Yongdae, Choi, Garam, Hong, Seokho, Jo, Inseong, Ahn, Jinsook, Choi, Sang Ho, Ha, Nam-Chul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society for Molecular and Cellular Biology 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5935101/
https://www.ncbi.nlm.nih.gov/pubmed/29487273
http://dx.doi.org/10.14348/molcells.2018.2190
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author Jang, Yongdae
Choi, Garam
Hong, Seokho
Jo, Inseong
Ahn, Jinsook
Choi, Sang Ho
Ha, Nam-Chul
author_facet Jang, Yongdae
Choi, Garam
Hong, Seokho
Jo, Inseong
Ahn, Jinsook
Choi, Sang Ho
Ha, Nam-Chul
author_sort Jang, Yongdae
collection PubMed
description LysR-type transcriptional regulators (LTTRs) contain an N-terminal DNA binding domain (DBD) and a C-terminal regulatory domain (RD). Typically, LTTRs function as homotetramers. VV2_1132 was identified in Vibrio vulnificus as an LTTR that is a homologue of HypT (also known as YjiE or QseD) in Escherichia coli. In this study, we determined the crystal structure of full-length VV2_1132 at a resolution of 2.2 Å, thereby revealing a novel combination of the domains in the tetrameric assembly. Only one DBD dimer in the tetramer can bind to DNA, because the DNA binding motifs of the other DBD dimer are completely buried in the tetrameric assembly. Structural and functional analyses of VV2_1132 suggest that it might not perform the same role as E. coli HypT, indicating that further study is required to elucidate the function of this gene in V. vulnificus. The unique structure of VV2_1132 extends our knowledge of LTTR function and mechanisms of action.
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spelling pubmed-59351012018-05-08 A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus Jang, Yongdae Choi, Garam Hong, Seokho Jo, Inseong Ahn, Jinsook Choi, Sang Ho Ha, Nam-Chul Mol Cells Article LysR-type transcriptional regulators (LTTRs) contain an N-terminal DNA binding domain (DBD) and a C-terminal regulatory domain (RD). Typically, LTTRs function as homotetramers. VV2_1132 was identified in Vibrio vulnificus as an LTTR that is a homologue of HypT (also known as YjiE or QseD) in Escherichia coli. In this study, we determined the crystal structure of full-length VV2_1132 at a resolution of 2.2 Å, thereby revealing a novel combination of the domains in the tetrameric assembly. Only one DBD dimer in the tetramer can bind to DNA, because the DNA binding motifs of the other DBD dimer are completely buried in the tetrameric assembly. Structural and functional analyses of VV2_1132 suggest that it might not perform the same role as E. coli HypT, indicating that further study is required to elucidate the function of this gene in V. vulnificus. The unique structure of VV2_1132 extends our knowledge of LTTR function and mechanisms of action. Korean Society for Molecular and Cellular Biology 2018-04-30 2018-02-27 /pmc/articles/PMC5935101/ /pubmed/29487273 http://dx.doi.org/10.14348/molcells.2018.2190 Text en © The Korean Society for Molecular and Cellular Biology. All rights reserved. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/
spellingShingle Article
Jang, Yongdae
Choi, Garam
Hong, Seokho
Jo, Inseong
Ahn, Jinsook
Choi, Sang Ho
Ha, Nam-Chul
A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus
title A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus
title_full A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus
title_fullStr A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus
title_full_unstemmed A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus
title_short A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus
title_sort novel tetrameric assembly configuration in vv2_1132, a lysr-type transcriptional regulator in vibrio vulnificus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5935101/
https://www.ncbi.nlm.nih.gov/pubmed/29487273
http://dx.doi.org/10.14348/molcells.2018.2190
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