Cargando…
A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus
LysR-type transcriptional regulators (LTTRs) contain an N-terminal DNA binding domain (DBD) and a C-terminal regulatory domain (RD). Typically, LTTRs function as homotetramers. VV2_1132 was identified in Vibrio vulnificus as an LTTR that is a homologue of HypT (also known as YjiE or QseD) in Escheri...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society for Molecular and Cellular Biology
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5935101/ https://www.ncbi.nlm.nih.gov/pubmed/29487273 http://dx.doi.org/10.14348/molcells.2018.2190 |
_version_ | 1783320246270033920 |
---|---|
author | Jang, Yongdae Choi, Garam Hong, Seokho Jo, Inseong Ahn, Jinsook Choi, Sang Ho Ha, Nam-Chul |
author_facet | Jang, Yongdae Choi, Garam Hong, Seokho Jo, Inseong Ahn, Jinsook Choi, Sang Ho Ha, Nam-Chul |
author_sort | Jang, Yongdae |
collection | PubMed |
description | LysR-type transcriptional regulators (LTTRs) contain an N-terminal DNA binding domain (DBD) and a C-terminal regulatory domain (RD). Typically, LTTRs function as homotetramers. VV2_1132 was identified in Vibrio vulnificus as an LTTR that is a homologue of HypT (also known as YjiE or QseD) in Escherichia coli. In this study, we determined the crystal structure of full-length VV2_1132 at a resolution of 2.2 Å, thereby revealing a novel combination of the domains in the tetrameric assembly. Only one DBD dimer in the tetramer can bind to DNA, because the DNA binding motifs of the other DBD dimer are completely buried in the tetrameric assembly. Structural and functional analyses of VV2_1132 suggest that it might not perform the same role as E. coli HypT, indicating that further study is required to elucidate the function of this gene in V. vulnificus. The unique structure of VV2_1132 extends our knowledge of LTTR function and mechanisms of action. |
format | Online Article Text |
id | pubmed-5935101 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Korean Society for Molecular and Cellular Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-59351012018-05-08 A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus Jang, Yongdae Choi, Garam Hong, Seokho Jo, Inseong Ahn, Jinsook Choi, Sang Ho Ha, Nam-Chul Mol Cells Article LysR-type transcriptional regulators (LTTRs) contain an N-terminal DNA binding domain (DBD) and a C-terminal regulatory domain (RD). Typically, LTTRs function as homotetramers. VV2_1132 was identified in Vibrio vulnificus as an LTTR that is a homologue of HypT (also known as YjiE or QseD) in Escherichia coli. In this study, we determined the crystal structure of full-length VV2_1132 at a resolution of 2.2 Å, thereby revealing a novel combination of the domains in the tetrameric assembly. Only one DBD dimer in the tetramer can bind to DNA, because the DNA binding motifs of the other DBD dimer are completely buried in the tetrameric assembly. Structural and functional analyses of VV2_1132 suggest that it might not perform the same role as E. coli HypT, indicating that further study is required to elucidate the function of this gene in V. vulnificus. The unique structure of VV2_1132 extends our knowledge of LTTR function and mechanisms of action. Korean Society for Molecular and Cellular Biology 2018-04-30 2018-02-27 /pmc/articles/PMC5935101/ /pubmed/29487273 http://dx.doi.org/10.14348/molcells.2018.2190 Text en © The Korean Society for Molecular and Cellular Biology. All rights reserved. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ |
spellingShingle | Article Jang, Yongdae Choi, Garam Hong, Seokho Jo, Inseong Ahn, Jinsook Choi, Sang Ho Ha, Nam-Chul A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus |
title | A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus |
title_full | A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus |
title_fullStr | A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus |
title_full_unstemmed | A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus |
title_short | A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator in Vibrio vulnificus |
title_sort | novel tetrameric assembly configuration in vv2_1132, a lysr-type transcriptional regulator in vibrio vulnificus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5935101/ https://www.ncbi.nlm.nih.gov/pubmed/29487273 http://dx.doi.org/10.14348/molcells.2018.2190 |
work_keys_str_mv | AT jangyongdae anoveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT choigaram anoveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT hongseokho anoveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT joinseong anoveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT ahnjinsook anoveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT choisangho anoveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT hanamchul anoveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT jangyongdae noveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT choigaram noveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT hongseokho noveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT joinseong noveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT ahnjinsook noveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT choisangho noveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus AT hanamchul noveltetramericassemblyconfigurationinvv21132alysrtypetranscriptionalregulatorinvibriovulnificus |