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A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms
BACKGROUND: Flow cytometry analysis is the method of choice for the differential diagnosis of hematologic disorders. It is typically performed by a trained hematopathologist through visual examination of bidimensional plots, making the analysis time-consuming and sometimes too subjective. Here, a pi...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Medknow Publications & Media Pvt Ltd
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5937296/ https://www.ncbi.nlm.nih.gov/pubmed/29770255 http://dx.doi.org/10.4103/jpi.jpi_76_17 |
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author | Angeletti, Cesar |
author_facet | Angeletti, Cesar |
author_sort | Angeletti, Cesar |
collection | PubMed |
description | BACKGROUND: Flow cytometry analysis is the method of choice for the differential diagnosis of hematologic disorders. It is typically performed by a trained hematopathologist through visual examination of bidimensional plots, making the analysis time-consuming and sometimes too subjective. Here, a pilot study applying genetic algorithms to flow cytometry data from normal and acute myeloid leukemia subjects is described. SUBJECTS AND METHODS: Initially, Flow Cytometry Standard files from 316 normal and 43 acute myeloid leukemia subjects were transformed into multidimensional FITS image metafiles. Training was performed through introduction of FITS metafiles from 4 normal and 4 acute myeloid leukemia in the artificial intelligence system. RESULTS: Two mathematical algorithms termed 018330 and 025886 were generated. When tested against a cohort of 312 normal and 39 acute myeloid leukemia subjects, both algorithms combined showed high discriminatory power with a receiver operating characteristic (ROC) curve of 0.912. CONCLUSIONS: The present results suggest that machine learning systems hold a great promise in the interpretation of hematological flow cytometry data. |
format | Online Article Text |
id | pubmed-5937296 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Medknow Publications & Media Pvt Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-59372962018-05-16 A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms Angeletti, Cesar J Pathol Inform Technical Note BACKGROUND: Flow cytometry analysis is the method of choice for the differential diagnosis of hematologic disorders. It is typically performed by a trained hematopathologist through visual examination of bidimensional plots, making the analysis time-consuming and sometimes too subjective. Here, a pilot study applying genetic algorithms to flow cytometry data from normal and acute myeloid leukemia subjects is described. SUBJECTS AND METHODS: Initially, Flow Cytometry Standard files from 316 normal and 43 acute myeloid leukemia subjects were transformed into multidimensional FITS image metafiles. Training was performed through introduction of FITS metafiles from 4 normal and 4 acute myeloid leukemia in the artificial intelligence system. RESULTS: Two mathematical algorithms termed 018330 and 025886 were generated. When tested against a cohort of 312 normal and 39 acute myeloid leukemia subjects, both algorithms combined showed high discriminatory power with a receiver operating characteristic (ROC) curve of 0.912. CONCLUSIONS: The present results suggest that machine learning systems hold a great promise in the interpretation of hematological flow cytometry data. Medknow Publications & Media Pvt Ltd 2018-04-20 /pmc/articles/PMC5937296/ /pubmed/29770255 http://dx.doi.org/10.4103/jpi.jpi_76_17 Text en Copyright: © 2018 Journal of Pathology Informatics http://creativecommons.org/licenses/by-nc-sa/4.0 This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms. |
spellingShingle | Technical Note Angeletti, Cesar A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms |
title | A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms |
title_full | A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms |
title_fullStr | A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms |
title_full_unstemmed | A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms |
title_short | A Method for the Interpretation of Flow Cytometry Data Using Genetic Algorithms |
title_sort | method for the interpretation of flow cytometry data using genetic algorithms |
topic | Technical Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5937296/ https://www.ncbi.nlm.nih.gov/pubmed/29770255 http://dx.doi.org/10.4103/jpi.jpi_76_17 |
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