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Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds
Most pathological pain conditions in patients and rodent pain models result in marked alterations in mechanosensation and the gold standard way to measure this is by use of von Frey fibers. These graded monofilaments are used to gauge the level of stimulus-evoked sensitivity present in the affected...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5938897/ https://www.ncbi.nlm.nih.gov/pubmed/29765323 http://dx.doi.org/10.3389/fphar.2018.00433 |
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author | Gonzalez-Cano, Rafael Boivin, Bruno Bullock, Daniel Cornelissen, Laura Andrews, Nick Costigan, Michael |
author_facet | Gonzalez-Cano, Rafael Boivin, Bruno Bullock, Daniel Cornelissen, Laura Andrews, Nick Costigan, Michael |
author_sort | Gonzalez-Cano, Rafael |
collection | PubMed |
description | Most pathological pain conditions in patients and rodent pain models result in marked alterations in mechanosensation and the gold standard way to measure this is by use of von Frey fibers. These graded monofilaments are used to gauge the level of stimulus-evoked sensitivity present in the affected dermal region. One of the most popular methods used to determine von Frey thresholds is the up–down testing paradigm introduced by Dixon for patients in 1980 and by Chapman and colleagues for rodents in 1994. Although the up–down method is very accurate, leading to its widespread use, defining the 50% threshold from primary data is complex and requires a relatively time-consuming analysis step. We developed a computer program, the Up–Down Reader (UDReader), that can locate and recognize handwritten von Frey assessments from a scanned PDF document and translate these measurements into 50% pain thresholds. Automating the process of obtaining the 50% threshold values negates the need for reference tables or Microsoft Excel formulae and eliminates the chance of a manual calculation error. Our simple and straightforward method is designed to save research time while improving data collection accuracy and is freely available at https://sourceforge.net/projects/updownreader/ or in supplementary files attached to this manuscript. |
format | Online Article Text |
id | pubmed-5938897 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-59388972018-05-14 Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds Gonzalez-Cano, Rafael Boivin, Bruno Bullock, Daniel Cornelissen, Laura Andrews, Nick Costigan, Michael Front Pharmacol Pharmacology Most pathological pain conditions in patients and rodent pain models result in marked alterations in mechanosensation and the gold standard way to measure this is by use of von Frey fibers. These graded monofilaments are used to gauge the level of stimulus-evoked sensitivity present in the affected dermal region. One of the most popular methods used to determine von Frey thresholds is the up–down testing paradigm introduced by Dixon for patients in 1980 and by Chapman and colleagues for rodents in 1994. Although the up–down method is very accurate, leading to its widespread use, defining the 50% threshold from primary data is complex and requires a relatively time-consuming analysis step. We developed a computer program, the Up–Down Reader (UDReader), that can locate and recognize handwritten von Frey assessments from a scanned PDF document and translate these measurements into 50% pain thresholds. Automating the process of obtaining the 50% threshold values negates the need for reference tables or Microsoft Excel formulae and eliminates the chance of a manual calculation error. Our simple and straightforward method is designed to save research time while improving data collection accuracy and is freely available at https://sourceforge.net/projects/updownreader/ or in supplementary files attached to this manuscript. Frontiers Media S.A. 2018-05-01 /pmc/articles/PMC5938897/ /pubmed/29765323 http://dx.doi.org/10.3389/fphar.2018.00433 Text en Copyright © 2018 Gonzalez-Cano, Boivin, Bullock, Cornelissen, Andrews and Costigan. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Pharmacology Gonzalez-Cano, Rafael Boivin, Bruno Bullock, Daniel Cornelissen, Laura Andrews, Nick Costigan, Michael Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds |
title | Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds |
title_full | Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds |
title_fullStr | Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds |
title_full_unstemmed | Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds |
title_short | Up–Down Reader: An Open Source Program for Efficiently Processing 50% von Frey Thresholds |
title_sort | up–down reader: an open source program for efficiently processing 50% von frey thresholds |
topic | Pharmacology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5938897/ https://www.ncbi.nlm.nih.gov/pubmed/29765323 http://dx.doi.org/10.3389/fphar.2018.00433 |
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