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Species distribution model transferability and model grain size – finer may not always be better
Species distribution models have been used to predict the distribution of invasive species for conservation planning. Understanding spatial transferability of niche predictions is critical to promote species-habitat conservation and forecasting areas vulnerable to invasion. Grain size of predictor v...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5940916/ https://www.ncbi.nlm.nih.gov/pubmed/29740002 http://dx.doi.org/10.1038/s41598-018-25437-1 |
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author | Manzoor, Syed Amir Griffiths, Geoffrey Lukac, Martin |
author_facet | Manzoor, Syed Amir Griffiths, Geoffrey Lukac, Martin |
author_sort | Manzoor, Syed Amir |
collection | PubMed |
description | Species distribution models have been used to predict the distribution of invasive species for conservation planning. Understanding spatial transferability of niche predictions is critical to promote species-habitat conservation and forecasting areas vulnerable to invasion. Grain size of predictor variables is an important factor affecting the accuracy and transferability of species distribution models. Choice of grain size is often dependent on the type of predictor variables used and the selection of predictors sometimes rely on data availability. This study employed the MAXENT species distribution model to investigate the effect of the grain size on model transferability for an invasive plant species. We modelled the distribution of Rhododendron ponticum in Wales, U.K. and tested model performance and transferability by varying grain size (50 m, 300 m, and 1 km). MAXENT-based models are sensitive to grain size and selection of variables. We found that over-reliance on the commonly used bioclimatic variables may lead to less accurate models as it often compromises the finer grain size of biophysical variables which may be more important determinants of species distribution at small spatial scales. Model accuracy is likely to increase with decreasing grain size. However, successful model transferability may require optimization of model grain size. |
format | Online Article Text |
id | pubmed-5940916 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-59409162018-05-14 Species distribution model transferability and model grain size – finer may not always be better Manzoor, Syed Amir Griffiths, Geoffrey Lukac, Martin Sci Rep Article Species distribution models have been used to predict the distribution of invasive species for conservation planning. Understanding spatial transferability of niche predictions is critical to promote species-habitat conservation and forecasting areas vulnerable to invasion. Grain size of predictor variables is an important factor affecting the accuracy and transferability of species distribution models. Choice of grain size is often dependent on the type of predictor variables used and the selection of predictors sometimes rely on data availability. This study employed the MAXENT species distribution model to investigate the effect of the grain size on model transferability for an invasive plant species. We modelled the distribution of Rhododendron ponticum in Wales, U.K. and tested model performance and transferability by varying grain size (50 m, 300 m, and 1 km). MAXENT-based models are sensitive to grain size and selection of variables. We found that over-reliance on the commonly used bioclimatic variables may lead to less accurate models as it often compromises the finer grain size of biophysical variables which may be more important determinants of species distribution at small spatial scales. Model accuracy is likely to increase with decreasing grain size. However, successful model transferability may require optimization of model grain size. Nature Publishing Group UK 2018-05-08 /pmc/articles/PMC5940916/ /pubmed/29740002 http://dx.doi.org/10.1038/s41598-018-25437-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Manzoor, Syed Amir Griffiths, Geoffrey Lukac, Martin Species distribution model transferability and model grain size – finer may not always be better |
title | Species distribution model transferability and model grain size – finer may not always be better |
title_full | Species distribution model transferability and model grain size – finer may not always be better |
title_fullStr | Species distribution model transferability and model grain size – finer may not always be better |
title_full_unstemmed | Species distribution model transferability and model grain size – finer may not always be better |
title_short | Species distribution model transferability and model grain size – finer may not always be better |
title_sort | species distribution model transferability and model grain size – finer may not always be better |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5940916/ https://www.ncbi.nlm.nih.gov/pubmed/29740002 http://dx.doi.org/10.1038/s41598-018-25437-1 |
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