Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia

We sequenced two metagenomes from upper sediment layers (0 to 5 and 6 to 10 cm) from the Kanawha River, West Virginia. The watershed includes inputs from the forested Appalachian Mountains, surface coal mining, municipal residues, and extensive chemical manufacturing. The dominant bacterial phyla we...

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Autores principales: Huber, David H., Ugwuanyi, Ifeoma R., Malkaram, Sridhar A., Montenegro-Garcia, Natalia A., Lhilhi Noundou, Vadesse, Chavarria-Palma, Jesus E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5940941/
https://www.ncbi.nlm.nih.gov/pubmed/29724837
http://dx.doi.org/10.1128/genomeA.00350-18
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author Huber, David H.
Ugwuanyi, Ifeoma R.
Malkaram, Sridhar A.
Montenegro-Garcia, Natalia A.
Lhilhi Noundou, Vadesse
Chavarria-Palma, Jesus E.
author_facet Huber, David H.
Ugwuanyi, Ifeoma R.
Malkaram, Sridhar A.
Montenegro-Garcia, Natalia A.
Lhilhi Noundou, Vadesse
Chavarria-Palma, Jesus E.
author_sort Huber, David H.
collection PubMed
description We sequenced two metagenomes from upper sediment layers (0 to 5 and 6 to 10 cm) from the Kanawha River, West Virginia. The watershed includes inputs from the forested Appalachian Mountains, surface coal mining, municipal residues, and extensive chemical manufacturing. The dominant bacterial phyla were Proteobacteria, Bacteriodetes, Firmicutes, Actinobacteria, and Chloroflexi. Xenobiotic degradation pathways were present.
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spelling pubmed-59409412018-05-29 Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia Huber, David H. Ugwuanyi, Ifeoma R. Malkaram, Sridhar A. Montenegro-Garcia, Natalia A. Lhilhi Noundou, Vadesse Chavarria-Palma, Jesus E. Genome Announc Prokaryotes We sequenced two metagenomes from upper sediment layers (0 to 5 and 6 to 10 cm) from the Kanawha River, West Virginia. The watershed includes inputs from the forested Appalachian Mountains, surface coal mining, municipal residues, and extensive chemical manufacturing. The dominant bacterial phyla were Proteobacteria, Bacteriodetes, Firmicutes, Actinobacteria, and Chloroflexi. Xenobiotic degradation pathways were present. American Society for Microbiology 2018-05-03 /pmc/articles/PMC5940941/ /pubmed/29724837 http://dx.doi.org/10.1128/genomeA.00350-18 Text en Copyright © 2018 Huber et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Prokaryotes
Huber, David H.
Ugwuanyi, Ifeoma R.
Malkaram, Sridhar A.
Montenegro-Garcia, Natalia A.
Lhilhi Noundou, Vadesse
Chavarria-Palma, Jesus E.
Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia
title Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia
title_full Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia
title_fullStr Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia
title_full_unstemmed Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia
title_short Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia
title_sort metagenome sequences of sediment from a recovering industrialized appalachian river in west virginia
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5940941/
https://www.ncbi.nlm.nih.gov/pubmed/29724837
http://dx.doi.org/10.1128/genomeA.00350-18
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