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The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species
Genomic information is essential for taxonomic, phylogenetic, and functional studies to comprehensively decipher the characteristics of microorganisms, to explore microbiomes through metagenomics, and to answer fundamental questions of nature and human life. However, large gaps remain in the availab...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2018
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5941136/ https://www.ncbi.nlm.nih.gov/pubmed/29718202 http://dx.doi.org/10.1093/gigascience/giy026 |
| _version_ | 1783321232269115392 |
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| author | Wu, Linhuan McCluskey, Kevin Desmeth, Philippe Liu, Shuangjiang Hideaki, Sugawara Yin, Ye Moriya, Ohkuma Itoh, Takashi Kim, Cha Young Lee, Jung-Sook Zhou, Yuguang Kawasaki, Hiroko Hazbón, Manzour Hernando Robert, Vincent Boekhout, Teun Lima, Nelson Evtushenko, Lyudmila Boundy-Mills, Kyria Bunk, Boyke Moore, Edward R B Eurwilaichitr, Lily Ingsriswang, Supawadee Shah, Heena Yao, Su Jin, Tao Huang, Jinqun Shi, Wenyu Sun, Qinglan Fan, Guomei Li, Wei Li, Xian Kurtböke, İpek Ma, Juncai |
| author_facet | Wu, Linhuan McCluskey, Kevin Desmeth, Philippe Liu, Shuangjiang Hideaki, Sugawara Yin, Ye Moriya, Ohkuma Itoh, Takashi Kim, Cha Young Lee, Jung-Sook Zhou, Yuguang Kawasaki, Hiroko Hazbón, Manzour Hernando Robert, Vincent Boekhout, Teun Lima, Nelson Evtushenko, Lyudmila Boundy-Mills, Kyria Bunk, Boyke Moore, Edward R B Eurwilaichitr, Lily Ingsriswang, Supawadee Shah, Heena Yao, Su Jin, Tao Huang, Jinqun Shi, Wenyu Sun, Qinglan Fan, Guomei Li, Wei Li, Xian Kurtböke, İpek Ma, Juncai |
| author_sort | Wu, Linhuan |
| collection | PubMed |
| description | Genomic information is essential for taxonomic, phylogenetic, and functional studies to comprehensively decipher the characteristics of microorganisms, to explore microbiomes through metagenomics, and to answer fundamental questions of nature and human life. However, large gaps remain in the available genomic sequencing information published for bacterial and archaeal species, and the gaps are even larger for fungal type strains. The Global Catalogue of Microorganisms (GCM) leads an internationally coordinated effort to sequence type strains and close gaps in the genomic maps of microorganisms. Hence, the GCM aims to promote research by deep-mining genomic data. |
| format | Online Article Text |
| id | pubmed-5941136 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2018 |
| publisher | Oxford University Press |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-59411362018-05-15 The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species Wu, Linhuan McCluskey, Kevin Desmeth, Philippe Liu, Shuangjiang Hideaki, Sugawara Yin, Ye Moriya, Ohkuma Itoh, Takashi Kim, Cha Young Lee, Jung-Sook Zhou, Yuguang Kawasaki, Hiroko Hazbón, Manzour Hernando Robert, Vincent Boekhout, Teun Lima, Nelson Evtushenko, Lyudmila Boundy-Mills, Kyria Bunk, Boyke Moore, Edward R B Eurwilaichitr, Lily Ingsriswang, Supawadee Shah, Heena Yao, Su Jin, Tao Huang, Jinqun Shi, Wenyu Sun, Qinglan Fan, Guomei Li, Wei Li, Xian Kurtböke, İpek Ma, Juncai Gigascience Commentary Genomic information is essential for taxonomic, phylogenetic, and functional studies to comprehensively decipher the characteristics of microorganisms, to explore microbiomes through metagenomics, and to answer fundamental questions of nature and human life. However, large gaps remain in the available genomic sequencing information published for bacterial and archaeal species, and the gaps are even larger for fungal type strains. The Global Catalogue of Microorganisms (GCM) leads an internationally coordinated effort to sequence type strains and close gaps in the genomic maps of microorganisms. Hence, the GCM aims to promote research by deep-mining genomic data. Oxford University Press 2018-03-22 /pmc/articles/PMC5941136/ /pubmed/29718202 http://dx.doi.org/10.1093/gigascience/giy026 Text en © The Author(s) 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Commentary Wu, Linhuan McCluskey, Kevin Desmeth, Philippe Liu, Shuangjiang Hideaki, Sugawara Yin, Ye Moriya, Ohkuma Itoh, Takashi Kim, Cha Young Lee, Jung-Sook Zhou, Yuguang Kawasaki, Hiroko Hazbón, Manzour Hernando Robert, Vincent Boekhout, Teun Lima, Nelson Evtushenko, Lyudmila Boundy-Mills, Kyria Bunk, Boyke Moore, Edward R B Eurwilaichitr, Lily Ingsriswang, Supawadee Shah, Heena Yao, Su Jin, Tao Huang, Jinqun Shi, Wenyu Sun, Qinglan Fan, Guomei Li, Wei Li, Xian Kurtböke, İpek Ma, Juncai The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species |
| title | The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species |
| title_full | The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species |
| title_fullStr | The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species |
| title_full_unstemmed | The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species |
| title_short | The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species |
| title_sort | global catalogue of microorganisms 10k type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species |
| topic | Commentary |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5941136/ https://www.ncbi.nlm.nih.gov/pubmed/29718202 http://dx.doi.org/10.1093/gigascience/giy026 |
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