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CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases

CircR2Disease is a manually curated database, which provides a comprehensive resource for circRNA deregulation in various diseases. Increasing evidences have shown that circRNAs play critical roles in transcriptional, post-transcriptional and translational regulation. Therefore, the aberrant express...

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Detalles Bibliográficos
Autores principales: Fan, Chunyan, Lei, Xiujuan, Fang, Zengqiang, Jiang, Qinghua, Wu, Fang-Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5941138/
https://www.ncbi.nlm.nih.gov/pubmed/29741596
http://dx.doi.org/10.1093/database/bay044
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author Fan, Chunyan
Lei, Xiujuan
Fang, Zengqiang
Jiang, Qinghua
Wu, Fang-Xiang
author_facet Fan, Chunyan
Lei, Xiujuan
Fang, Zengqiang
Jiang, Qinghua
Wu, Fang-Xiang
author_sort Fan, Chunyan
collection PubMed
description CircR2Disease is a manually curated database, which provides a comprehensive resource for circRNA deregulation in various diseases. Increasing evidences have shown that circRNAs play critical roles in transcriptional, post-transcriptional and translational regulation. Therefore, the aberrant expression of circRNAs has been associated with a group of diseases. It is significant to develop a high-quality database to deposit the deregulated circRNAs in diseases. The current version of CircR2Disease contains 725 associations between 661 circRNAs and 100 diseases by reviewing existing literatures. Each entry in the CircR2Disease contains detailed information for the circRNA–disease relationship, including circRNA name, coordinates and gene symbol, disease name, expression patterns of circRNA, experimental techniques, a brief description of the circRNA–disease relationship, year of publication and the PubMed ID. CircR2Disease provides a user-friendly interface to browse, search and download as well as to submit novel disease-related circRNAs. CircR2Disease could be very beneficial for researches to investigate the mechanism of disease-related circRNAs and explore the appropriate algorithms for predicting novel associations. Database URL: http://bioinfo.snnu.edu.cn/CircR2Disease/
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spelling pubmed-59411382018-05-15 CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases Fan, Chunyan Lei, Xiujuan Fang, Zengqiang Jiang, Qinghua Wu, Fang-Xiang Database (Oxford) Original Article CircR2Disease is a manually curated database, which provides a comprehensive resource for circRNA deregulation in various diseases. Increasing evidences have shown that circRNAs play critical roles in transcriptional, post-transcriptional and translational regulation. Therefore, the aberrant expression of circRNAs has been associated with a group of diseases. It is significant to develop a high-quality database to deposit the deregulated circRNAs in diseases. The current version of CircR2Disease contains 725 associations between 661 circRNAs and 100 diseases by reviewing existing literatures. Each entry in the CircR2Disease contains detailed information for the circRNA–disease relationship, including circRNA name, coordinates and gene symbol, disease name, expression patterns of circRNA, experimental techniques, a brief description of the circRNA–disease relationship, year of publication and the PubMed ID. CircR2Disease provides a user-friendly interface to browse, search and download as well as to submit novel disease-related circRNAs. CircR2Disease could be very beneficial for researches to investigate the mechanism of disease-related circRNAs and explore the appropriate algorithms for predicting novel associations. Database URL: http://bioinfo.snnu.edu.cn/CircR2Disease/ Oxford University Press 2018-05-04 /pmc/articles/PMC5941138/ /pubmed/29741596 http://dx.doi.org/10.1093/database/bay044 Text en © The Author(s) 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Fan, Chunyan
Lei, Xiujuan
Fang, Zengqiang
Jiang, Qinghua
Wu, Fang-Xiang
CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases
title CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases
title_full CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases
title_fullStr CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases
title_full_unstemmed CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases
title_short CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases
title_sort circr2disease: a manually curated database for experimentally supported circular rnas associated with various diseases
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5941138/
https://www.ncbi.nlm.nih.gov/pubmed/29741596
http://dx.doi.org/10.1093/database/bay044
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