Cargando…

Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma

BACKGROUND: The upregulated expression of versican (VCAN) promotes the proliferation, invasion, and metastasis of various types of human cancer cells, including hepatocellular carcinoma (HCC) cells. PATIENTS AND METHODS: In this study, genetic variants in the exon region of VCAN were genotyped by DN...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Xiaoguang, Han, Chuangye, Liao, Xiwen, Yu, Long, Zhu, Guangzhi, Su, Hao, Qin, Wei, Lu, Sicong, Ye, Xinping, Peng, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove Medical Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5942399/
https://www.ncbi.nlm.nih.gov/pubmed/29765250
http://dx.doi.org/10.2147/CMAR.S161906
_version_ 1783321462814277632
author Liu, Xiaoguang
Han, Chuangye
Liao, Xiwen
Yu, Long
Zhu, Guangzhi
Su, Hao
Qin, Wei
Lu, Sicong
Ye, Xinping
Peng, Tao
author_facet Liu, Xiaoguang
Han, Chuangye
Liao, Xiwen
Yu, Long
Zhu, Guangzhi
Su, Hao
Qin, Wei
Lu, Sicong
Ye, Xinping
Peng, Tao
author_sort Liu, Xiaoguang
collection PubMed
description BACKGROUND: The upregulated expression of versican (VCAN) promotes the proliferation, invasion, and metastasis of various types of human cancer cells, including hepatocellular carcinoma (HCC) cells. PATIENTS AND METHODS: In this study, genetic variants in the exon region of VCAN were genotyped by DNA sequencing. Prognostic values of VCAN exon single nucleotide polymorphisms (SNPs) were assessed by Kaplan–Meier with the log-rank test, and uni- and multivariate Cox proportional hazard regression model. RESULTS: A total of 111 patients with resected hepatitis B virus-associated early-stage HCC were collected for genotyping VCAN exon SNPs using Sanger DNA sequencing. Haplotype analysis was performed using Haploview 4.2. Survival data were analyzed using Kaplan–Meier curves and Cox proportional hazards regression analyses. The rs2652098, rs309559, rs188703, rs160278, and rs160277 SNPs were significantly associated with overall patient survival (p<0.001, p=0.012, p=0.010, p=0.007, and p=0.007, respectively). Patients carrying the TAGTG haplotype had a poorer prognosis than those with the most common CGAAT haplotype, after adjusting for tumor size, tumor capsule, and regional invasion (adjusted hazard ratio [HR] =2.06, 95% CI: 1.27–3.34, p=0.003). Meanwhile, patients with the TAGTG haplotype and a larger tumor size or an incomplete tumor capsule had an increased risk of death, compared with the others (adjusted HR =3.00, 95% CI: 1.67–5.36, p<0.001; and adjusted HR = 1.99, 95% CI = 1.12–3.55, p = 0.02, respectively). The online database mining analysis showed that upregulated VCAN expression in HCC tissues was associated with a poor overall survival of 148 HCC patients. CONCLUSION: Genetic variants in the exon region of VCAN were associated with overall survival in patients with resected early-stage hepatitis B virus-associated HCC, and may be a potential prognostic biomarker.
format Online
Article
Text
id pubmed-5942399
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Dove Medical Press
record_format MEDLINE/PubMed
spelling pubmed-59423992018-05-15 Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma Liu, Xiaoguang Han, Chuangye Liao, Xiwen Yu, Long Zhu, Guangzhi Su, Hao Qin, Wei Lu, Sicong Ye, Xinping Peng, Tao Cancer Manag Res Original Research BACKGROUND: The upregulated expression of versican (VCAN) promotes the proliferation, invasion, and metastasis of various types of human cancer cells, including hepatocellular carcinoma (HCC) cells. PATIENTS AND METHODS: In this study, genetic variants in the exon region of VCAN were genotyped by DNA sequencing. Prognostic values of VCAN exon single nucleotide polymorphisms (SNPs) were assessed by Kaplan–Meier with the log-rank test, and uni- and multivariate Cox proportional hazard regression model. RESULTS: A total of 111 patients with resected hepatitis B virus-associated early-stage HCC were collected for genotyping VCAN exon SNPs using Sanger DNA sequencing. Haplotype analysis was performed using Haploview 4.2. Survival data were analyzed using Kaplan–Meier curves and Cox proportional hazards regression analyses. The rs2652098, rs309559, rs188703, rs160278, and rs160277 SNPs were significantly associated with overall patient survival (p<0.001, p=0.012, p=0.010, p=0.007, and p=0.007, respectively). Patients carrying the TAGTG haplotype had a poorer prognosis than those with the most common CGAAT haplotype, after adjusting for tumor size, tumor capsule, and regional invasion (adjusted hazard ratio [HR] =2.06, 95% CI: 1.27–3.34, p=0.003). Meanwhile, patients with the TAGTG haplotype and a larger tumor size or an incomplete tumor capsule had an increased risk of death, compared with the others (adjusted HR =3.00, 95% CI: 1.67–5.36, p<0.001; and adjusted HR = 1.99, 95% CI = 1.12–3.55, p = 0.02, respectively). The online database mining analysis showed that upregulated VCAN expression in HCC tissues was associated with a poor overall survival of 148 HCC patients. CONCLUSION: Genetic variants in the exon region of VCAN were associated with overall survival in patients with resected early-stage hepatitis B virus-associated HCC, and may be a potential prognostic biomarker. Dove Medical Press 2018-05-04 /pmc/articles/PMC5942399/ /pubmed/29765250 http://dx.doi.org/10.2147/CMAR.S161906 Text en © 2018 Liu et al. This work is published and licensed by Dove Medical Press Limited The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed.
spellingShingle Original Research
Liu, Xiaoguang
Han, Chuangye
Liao, Xiwen
Yu, Long
Zhu, Guangzhi
Su, Hao
Qin, Wei
Lu, Sicong
Ye, Xinping
Peng, Tao
Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma
title Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma
title_full Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma
title_fullStr Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma
title_full_unstemmed Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma
title_short Genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis B virus-associated hepatocellular carcinoma
title_sort genetic variants in the exon region of versican predict survival of patients with resected early-stage hepatitis b virus-associated hepatocellular carcinoma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5942399/
https://www.ncbi.nlm.nih.gov/pubmed/29765250
http://dx.doi.org/10.2147/CMAR.S161906
work_keys_str_mv AT liuxiaoguang geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT hanchuangye geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT liaoxiwen geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT yulong geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT zhuguangzhi geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT suhao geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT qinwei geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT lusicong geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT yexinping geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma
AT pengtao geneticvariantsintheexonregionofversicanpredictsurvivalofpatientswithresectedearlystagehepatitisbvirusassociatedhepatocellularcarcinoma