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STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis

Dot-blot hybridization and high-resolution melting curve methods are used to detect G6PD gene mutations; however, the performance and throughput limitations of these methods hinder their use for screening large populations. For simple screening, we developed a novel approach called “Amplification Re...

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Autores principales: Fan, Zuqian, Weng, Xunjin, Huang, Guosheng, Pan, Zhijian, Long, Zhao, Fan, Qiongying, Tang, Weijun, Fang, Lin, Long, Ju, Hu, Tian, Huang, Yongxia, Sun, Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5944484/
https://www.ncbi.nlm.nih.gov/pubmed/29702993
http://dx.doi.org/10.1097/MD.0000000000010426
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author Fan, Zuqian
Weng, Xunjin
Huang, Guosheng
Pan, Zhijian
Long, Zhao
Fan, Qiongying
Tang, Weijun
Fang, Lin
Long, Ju
Hu, Tian
Huang, Yongxia
Sun, Lei
author_facet Fan, Zuqian
Weng, Xunjin
Huang, Guosheng
Pan, Zhijian
Long, Zhao
Fan, Qiongying
Tang, Weijun
Fang, Lin
Long, Ju
Hu, Tian
Huang, Yongxia
Sun, Lei
author_sort Fan, Zuqian
collection PubMed
description Dot-blot hybridization and high-resolution melting curve methods are used to detect G6PD gene mutations; however, the performance and throughput limitations of these methods hinder their use for screening large populations. For simple screening, we developed a novel approach called “Amplification Refractory Mutation System combined with Melting Curve Analysis (ARMS-MC),” which enables rapid and batch-based detection of the 6 most common G6PD mutations. In this method, we established 4 PCR reaction systems that can be used to detect the 6 most common G6PD mutations (c.95A>G, c.392G>T, c.871G>A, c.1024C>T, c.1376G>T, and c.1388G>A) in the Chinese population. The ARMS-MC method was evaluated with 174 cases of clinical G6PD-deficient samples, and the results were verified by direct sequencing at G6PD gene exons. The results showed that 170 samples had ≥1 of the 6 mutations, which accounted for 97.70% of all mutations. These results were consistent with the results of direct sequencing with 100% accuracy and specificity. Sequencing validation revealed other mutations in the 4 samples in which no mutation was detected by the ARMS-MC method. ARMS-MC provides a rapid, simple, inexpensive, and accurate screening method for detecting the most common G6PD mutations in Chinese people.
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spelling pubmed-59444842018-05-15 STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis Fan, Zuqian Weng, Xunjin Huang, Guosheng Pan, Zhijian Long, Zhao Fan, Qiongying Tang, Weijun Fang, Lin Long, Ju Hu, Tian Huang, Yongxia Sun, Lei Medicine (Baltimore) Research Article Dot-blot hybridization and high-resolution melting curve methods are used to detect G6PD gene mutations; however, the performance and throughput limitations of these methods hinder their use for screening large populations. For simple screening, we developed a novel approach called “Amplification Refractory Mutation System combined with Melting Curve Analysis (ARMS-MC),” which enables rapid and batch-based detection of the 6 most common G6PD mutations. In this method, we established 4 PCR reaction systems that can be used to detect the 6 most common G6PD mutations (c.95A>G, c.392G>T, c.871G>A, c.1024C>T, c.1376G>T, and c.1388G>A) in the Chinese population. The ARMS-MC method was evaluated with 174 cases of clinical G6PD-deficient samples, and the results were verified by direct sequencing at G6PD gene exons. The results showed that 170 samples had ≥1 of the 6 mutations, which accounted for 97.70% of all mutations. These results were consistent with the results of direct sequencing with 100% accuracy and specificity. Sequencing validation revealed other mutations in the 4 samples in which no mutation was detected by the ARMS-MC method. ARMS-MC provides a rapid, simple, inexpensive, and accurate screening method for detecting the most common G6PD mutations in Chinese people. Wolters Kluwer Health 2018-04-27 /pmc/articles/PMC5944484/ /pubmed/29702993 http://dx.doi.org/10.1097/MD.0000000000010426 Text en Copyright © 2018 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-sa/4.0 This is an open access article distributed under the Creative Commons Attribution-ShareAlike License 4.0, which allows others to remix, tweak, and build upon the work, even for commercial purposes, as long as the author is credited and the new creations are licensed under the identical terms. http://creativecommons.org/licenses/by-sa/4.0
spellingShingle Research Article
Fan, Zuqian
Weng, Xunjin
Huang, Guosheng
Pan, Zhijian
Long, Zhao
Fan, Qiongying
Tang, Weijun
Fang, Lin
Long, Ju
Hu, Tian
Huang, Yongxia
Sun, Lei
STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis
title STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis
title_full STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis
title_fullStr STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis
title_full_unstemmed STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis
title_short STARD—rapid screening for the 6 most common G6PD gene mutations in the Chinese population using the amplification refractory mutation system combined with melting curve analysis
title_sort stard—rapid screening for the 6 most common g6pd gene mutations in the chinese population using the amplification refractory mutation system combined with melting curve analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5944484/
https://www.ncbi.nlm.nih.gov/pubmed/29702993
http://dx.doi.org/10.1097/MD.0000000000010426
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