ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole genome sequencing data

MOTIVATION: Sequencing studies on non-model organisms often interrogate both genomes and transcriptomes with massive amounts of short sequences. Such studies require de novo analysis tools and techniques, when the species and closely related species lack high quality reference resources. For certain...

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Detalles Bibliográficos
Autores principales: Khan, Hamza, Mohamadi, Hamid, Vandervalk, Benjamin P, Warren, Rene L, Chu, Justin, Birol, Inanc
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5946899/
https://www.ncbi.nlm.nih.gov/pubmed/29300846
http://dx.doi.org/10.1093/bioinformatics/btx839

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5946899/
https://www.ncbi.nlm.nih.gov/pubmed/29300846
http://dx.doi.org/10.1093/bioinformatics/btx839

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