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Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea
PREMISE OF THE STUDY: To enhance our understanding of evolutionary consequences and to establish a suitable conservation strategy, we isolated microsatellite markers for the endangered Bupleurum latissimum (Apiaceae), which is endemic to the oceanic Ulleung Island. We also attempted cross‐amplificat...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5947609/ https://www.ncbi.nlm.nih.gov/pubmed/30131886 http://dx.doi.org/10.1002/aps3.1144 |
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author | Lee, Jung‐Hyun Yoon, Chang Young Han, Eun‐Kyeong Kim, Joo‐Hwan |
author_facet | Lee, Jung‐Hyun Yoon, Chang Young Han, Eun‐Kyeong Kim, Joo‐Hwan |
author_sort | Lee, Jung‐Hyun |
collection | PubMed |
description | PREMISE OF THE STUDY: To enhance our understanding of evolutionary consequences and to establish a suitable conservation strategy, we isolated microsatellite markers for the endangered Bupleurum latissimum (Apiaceae), which is endemic to the oceanic Ulleung Island. We also attempted cross‐amplification in B. euphorbioides and B. longeradiatum to investigate its continental progenitors. METHODS AND RESULTS: Using high‐throughput sequencing data, we developed 26 polymorphic microsatellite loci in three multiplexes, of which 13 loci were polymorphic in the two related species. For B. latissimum, alleles numbered two to four and the observed and expected heterozygosity ranged from 0.000 to 0.500 and 0.061 to 0.529, respectively. CONCLUSIONS: These developed markers will be useful for understanding evolutionary patterns of B. latissimum in an oceanic island system and for establishing suitable conservation strategies at the genetic level. |
format | Online Article Text |
id | pubmed-5947609 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-59476092018-08-21 Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea Lee, Jung‐Hyun Yoon, Chang Young Han, Eun‐Kyeong Kim, Joo‐Hwan Appl Plant Sci Primer Notes PREMISE OF THE STUDY: To enhance our understanding of evolutionary consequences and to establish a suitable conservation strategy, we isolated microsatellite markers for the endangered Bupleurum latissimum (Apiaceae), which is endemic to the oceanic Ulleung Island. We also attempted cross‐amplification in B. euphorbioides and B. longeradiatum to investigate its continental progenitors. METHODS AND RESULTS: Using high‐throughput sequencing data, we developed 26 polymorphic microsatellite loci in three multiplexes, of which 13 loci were polymorphic in the two related species. For B. latissimum, alleles numbered two to four and the observed and expected heterozygosity ranged from 0.000 to 0.500 and 0.061 to 0.529, respectively. CONCLUSIONS: These developed markers will be useful for understanding evolutionary patterns of B. latissimum in an oceanic island system and for establishing suitable conservation strategies at the genetic level. John Wiley and Sons Inc. 2018-05-02 /pmc/articles/PMC5947609/ /pubmed/30131886 http://dx.doi.org/10.1002/aps3.1144 Text en © 2018 Lee et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Primer Notes Lee, Jung‐Hyun Yoon, Chang Young Han, Eun‐Kyeong Kim, Joo‐Hwan Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea |
title | Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea |
title_full | Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea |
title_fullStr | Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea |
title_full_unstemmed | Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea |
title_short | Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea |
title_sort | development of 26 microsatellite markers in bupleurum latissimum (apiaceae), an endangered plant endemic to ulleung island, korea |
topic | Primer Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5947609/ https://www.ncbi.nlm.nih.gov/pubmed/30131886 http://dx.doi.org/10.1002/aps3.1144 |
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