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Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea

PREMISE OF THE STUDY: To enhance our understanding of evolutionary consequences and to establish a suitable conservation strategy, we isolated microsatellite markers for the endangered Bupleurum latissimum (Apiaceae), which is endemic to the oceanic Ulleung Island. We also attempted cross‐amplificat...

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Autores principales: Lee, Jung‐Hyun, Yoon, Chang Young, Han, Eun‐Kyeong, Kim, Joo‐Hwan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5947609/
https://www.ncbi.nlm.nih.gov/pubmed/30131886
http://dx.doi.org/10.1002/aps3.1144
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author Lee, Jung‐Hyun
Yoon, Chang Young
Han, Eun‐Kyeong
Kim, Joo‐Hwan
author_facet Lee, Jung‐Hyun
Yoon, Chang Young
Han, Eun‐Kyeong
Kim, Joo‐Hwan
author_sort Lee, Jung‐Hyun
collection PubMed
description PREMISE OF THE STUDY: To enhance our understanding of evolutionary consequences and to establish a suitable conservation strategy, we isolated microsatellite markers for the endangered Bupleurum latissimum (Apiaceae), which is endemic to the oceanic Ulleung Island. We also attempted cross‐amplification in B. euphorbioides and B. longeradiatum to investigate its continental progenitors. METHODS AND RESULTS: Using high‐throughput sequencing data, we developed 26 polymorphic microsatellite loci in three multiplexes, of which 13 loci were polymorphic in the two related species. For B. latissimum, alleles numbered two to four and the observed and expected heterozygosity ranged from 0.000 to 0.500 and 0.061 to 0.529, respectively. CONCLUSIONS: These developed markers will be useful for understanding evolutionary patterns of B. latissimum in an oceanic island system and for establishing suitable conservation strategies at the genetic level.
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spelling pubmed-59476092018-08-21 Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea Lee, Jung‐Hyun Yoon, Chang Young Han, Eun‐Kyeong Kim, Joo‐Hwan Appl Plant Sci Primer Notes PREMISE OF THE STUDY: To enhance our understanding of evolutionary consequences and to establish a suitable conservation strategy, we isolated microsatellite markers for the endangered Bupleurum latissimum (Apiaceae), which is endemic to the oceanic Ulleung Island. We also attempted cross‐amplification in B. euphorbioides and B. longeradiatum to investigate its continental progenitors. METHODS AND RESULTS: Using high‐throughput sequencing data, we developed 26 polymorphic microsatellite loci in three multiplexes, of which 13 loci were polymorphic in the two related species. For B. latissimum, alleles numbered two to four and the observed and expected heterozygosity ranged from 0.000 to 0.500 and 0.061 to 0.529, respectively. CONCLUSIONS: These developed markers will be useful for understanding evolutionary patterns of B. latissimum in an oceanic island system and for establishing suitable conservation strategies at the genetic level. John Wiley and Sons Inc. 2018-05-02 /pmc/articles/PMC5947609/ /pubmed/30131886 http://dx.doi.org/10.1002/aps3.1144 Text en © 2018 Lee et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Primer Notes
Lee, Jung‐Hyun
Yoon, Chang Young
Han, Eun‐Kyeong
Kim, Joo‐Hwan
Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea
title Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea
title_full Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea
title_fullStr Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea
title_full_unstemmed Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea
title_short Development of 26 microsatellite markers in Bupleurum latissimum (Apiaceae), an endangered plant endemic to Ulleung Island, Korea
title_sort development of 26 microsatellite markers in bupleurum latissimum (apiaceae), an endangered plant endemic to ulleung island, korea
topic Primer Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5947609/
https://www.ncbi.nlm.nih.gov/pubmed/30131886
http://dx.doi.org/10.1002/aps3.1144
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