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Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model
The study introduces a novel method for automatic segmentation of vertebral column tissue from MRI images. The paper describes a method that combines multiple stages of Machine Learning techniques to recognize and separate different tissues of the human spine. For the needs of this paper, 50 MRI exa...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949193/ https://www.ncbi.nlm.nih.gov/pubmed/29854791 http://dx.doi.org/10.1155/2018/7952946 |
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author | Gaweł, Dominik Główka, Paweł Kotwicki, Tomasz Nowak, Michał |
author_facet | Gaweł, Dominik Główka, Paweł Kotwicki, Tomasz Nowak, Michał |
author_sort | Gaweł, Dominik |
collection | PubMed |
description | The study introduces a novel method for automatic segmentation of vertebral column tissue from MRI images. The paper describes a method that combines multiple stages of Machine Learning techniques to recognize and separate different tissues of the human spine. For the needs of this paper, 50 MRI examinations presenting lumbosacral spine of patients with low back pain were selected. After the initial filtration, automatic vertebrae recognition using Cascade Classifier takes place. Afterwards the main segmentation process using the patch based Active Appearance Model is performed. Obtained results are interpolated using centripetal Catmull–Rom splines. The method was tested on previously unseen vertebrae images segmented manually by 5 physicians. A test validating algorithm convergence per iteration was performed and the Intraclass Correlation Coefficient was calculated. Additionally, the 10-fold cross-validation analysis has been done. Presented method proved to be comparable to the physicians (FF = 90.19 ± 1.01%). Moreover results confirmed a proper algorithm convergence. Automatically segmented area correlated well with manual segmentation for single measurements ([Formula: see text]) and for average measurements ([Formula: see text]) with p = 0.05. The 10-fold cross-validation analysis (FF = 91.37 ± 1.13%) confirmed a good model generalization resulting in practical performance. |
format | Online Article Text |
id | pubmed-5949193 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-59491932018-05-31 Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model Gaweł, Dominik Główka, Paweł Kotwicki, Tomasz Nowak, Michał Biomed Res Int Research Article The study introduces a novel method for automatic segmentation of vertebral column tissue from MRI images. The paper describes a method that combines multiple stages of Machine Learning techniques to recognize and separate different tissues of the human spine. For the needs of this paper, 50 MRI examinations presenting lumbosacral spine of patients with low back pain were selected. After the initial filtration, automatic vertebrae recognition using Cascade Classifier takes place. Afterwards the main segmentation process using the patch based Active Appearance Model is performed. Obtained results are interpolated using centripetal Catmull–Rom splines. The method was tested on previously unseen vertebrae images segmented manually by 5 physicians. A test validating algorithm convergence per iteration was performed and the Intraclass Correlation Coefficient was calculated. Additionally, the 10-fold cross-validation analysis has been done. Presented method proved to be comparable to the physicians (FF = 90.19 ± 1.01%). Moreover results confirmed a proper algorithm convergence. Automatically segmented area correlated well with manual segmentation for single measurements ([Formula: see text]) and for average measurements ([Formula: see text]) with p = 0.05. The 10-fold cross-validation analysis (FF = 91.37 ± 1.13%) confirmed a good model generalization resulting in practical performance. Hindawi 2018-04-29 /pmc/articles/PMC5949193/ /pubmed/29854791 http://dx.doi.org/10.1155/2018/7952946 Text en Copyright © 2018 Dominik Gaweł et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Gaweł, Dominik Główka, Paweł Kotwicki, Tomasz Nowak, Michał Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model |
title | Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model |
title_full | Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model |
title_fullStr | Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model |
title_full_unstemmed | Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model |
title_short | Automatic Spine Tissue Segmentation from MRI Data Based on Cascade of Boosted Classifiers and Active Appearance Model |
title_sort | automatic spine tissue segmentation from mri data based on cascade of boosted classifiers and active appearance model |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949193/ https://www.ncbi.nlm.nih.gov/pubmed/29854791 http://dx.doi.org/10.1155/2018/7952946 |
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