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Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population
PURPOSE: Kawasaki disease (KD) is a mucocutaneous lymph node syndrome. It is mainly seen in young children under the age of five. KD is a multifactorial disorder that includes genetic variants. The present study investigated the association between KD and single nucleotide polymorphisms (SNPs) in th...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Yonsei University College of Medicine
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949294/ https://www.ncbi.nlm.nih.gov/pubmed/29749135 http://dx.doi.org/10.3349/ymj.2018.59.4.519 |
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author | Bae, Yoonsun Shin, Dongjik Nam, Jiho Lee, Hye Rim Kim, Jun Sung Kim, Kyu Yeun Kim, Dong Soo Chung, Yeun-Jun |
author_facet | Bae, Yoonsun Shin, Dongjik Nam, Jiho Lee, Hye Rim Kim, Jun Sung Kim, Kyu Yeun Kim, Dong Soo Chung, Yeun-Jun |
author_sort | Bae, Yoonsun |
collection | PubMed |
description | PURPOSE: Kawasaki disease (KD) is a mucocutaneous lymph node syndrome. It is mainly seen in young children under the age of five. KD is a multifactorial disorder that includes genetic variants. The present study investigated the association between KD and single nucleotide polymorphisms (SNPs) in the candidate gene early B cell factor 2 (EBF2), which is associated with inflammation markers. MATERIALS AND METHODS: An SNP analysis was performed by whole exon sequencing of the EBF2 gene. Our study comprised a total of 495 subjects (295 KD patients and 200 unrelated normal controls) from a Korean population. Tag SNPs were discovered using the Haploview program. Genotyping of the EBF2 gene was performed with the TaqMan® assay with real-time PCR methods. RESULTS: Polymorphism of rs10866845 showed a significant difference in allele frequency between KD patients and controls (p=0.040). The EBF2 gene polymorphisms were significantly associated with KD on logistic regression analysis. CONCLUSION: EBF2 gene variants can contribute to KD in the Korean population. |
format | Online Article Text |
id | pubmed-5949294 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Yonsei University College of Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-59492942018-06-01 Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population Bae, Yoonsun Shin, Dongjik Nam, Jiho Lee, Hye Rim Kim, Jun Sung Kim, Kyu Yeun Kim, Dong Soo Chung, Yeun-Jun Yonsei Med J Original Article PURPOSE: Kawasaki disease (KD) is a mucocutaneous lymph node syndrome. It is mainly seen in young children under the age of five. KD is a multifactorial disorder that includes genetic variants. The present study investigated the association between KD and single nucleotide polymorphisms (SNPs) in the candidate gene early B cell factor 2 (EBF2), which is associated with inflammation markers. MATERIALS AND METHODS: An SNP analysis was performed by whole exon sequencing of the EBF2 gene. Our study comprised a total of 495 subjects (295 KD patients and 200 unrelated normal controls) from a Korean population. Tag SNPs were discovered using the Haploview program. Genotyping of the EBF2 gene was performed with the TaqMan® assay with real-time PCR methods. RESULTS: Polymorphism of rs10866845 showed a significant difference in allele frequency between KD patients and controls (p=0.040). The EBF2 gene polymorphisms were significantly associated with KD on logistic regression analysis. CONCLUSION: EBF2 gene variants can contribute to KD in the Korean population. Yonsei University College of Medicine 2018-06-01 2018-05-03 /pmc/articles/PMC5949294/ /pubmed/29749135 http://dx.doi.org/10.3349/ymj.2018.59.4.519 Text en © Copyright: Yonsei University College of Medicine 2018 http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Bae, Yoonsun Shin, Dongjik Nam, Jiho Lee, Hye Rim Kim, Jun Sung Kim, Kyu Yeun Kim, Dong Soo Chung, Yeun-Jun Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population |
title | Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population |
title_full | Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population |
title_fullStr | Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population |
title_full_unstemmed | Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population |
title_short | Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population |
title_sort | variants in the gene ebf2 are associated with kawasaki disease in a korean population |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949294/ https://www.ncbi.nlm.nih.gov/pubmed/29749135 http://dx.doi.org/10.3349/ymj.2018.59.4.519 |
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