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Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population

PURPOSE: Kawasaki disease (KD) is a mucocutaneous lymph node syndrome. It is mainly seen in young children under the age of five. KD is a multifactorial disorder that includes genetic variants. The present study investigated the association between KD and single nucleotide polymorphisms (SNPs) in th...

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Autores principales: Bae, Yoonsun, Shin, Dongjik, Nam, Jiho, Lee, Hye Rim, Kim, Jun Sung, Kim, Kyu Yeun, Kim, Dong Soo, Chung, Yeun-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Yonsei University College of Medicine 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949294/
https://www.ncbi.nlm.nih.gov/pubmed/29749135
http://dx.doi.org/10.3349/ymj.2018.59.4.519
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author Bae, Yoonsun
Shin, Dongjik
Nam, Jiho
Lee, Hye Rim
Kim, Jun Sung
Kim, Kyu Yeun
Kim, Dong Soo
Chung, Yeun-Jun
author_facet Bae, Yoonsun
Shin, Dongjik
Nam, Jiho
Lee, Hye Rim
Kim, Jun Sung
Kim, Kyu Yeun
Kim, Dong Soo
Chung, Yeun-Jun
author_sort Bae, Yoonsun
collection PubMed
description PURPOSE: Kawasaki disease (KD) is a mucocutaneous lymph node syndrome. It is mainly seen in young children under the age of five. KD is a multifactorial disorder that includes genetic variants. The present study investigated the association between KD and single nucleotide polymorphisms (SNPs) in the candidate gene early B cell factor 2 (EBF2), which is associated with inflammation markers. MATERIALS AND METHODS: An SNP analysis was performed by whole exon sequencing of the EBF2 gene. Our study comprised a total of 495 subjects (295 KD patients and 200 unrelated normal controls) from a Korean population. Tag SNPs were discovered using the Haploview program. Genotyping of the EBF2 gene was performed with the TaqMan® assay with real-time PCR methods. RESULTS: Polymorphism of rs10866845 showed a significant difference in allele frequency between KD patients and controls (p=0.040). The EBF2 gene polymorphisms were significantly associated with KD on logistic regression analysis. CONCLUSION: EBF2 gene variants can contribute to KD in the Korean population.
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spelling pubmed-59492942018-06-01 Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population Bae, Yoonsun Shin, Dongjik Nam, Jiho Lee, Hye Rim Kim, Jun Sung Kim, Kyu Yeun Kim, Dong Soo Chung, Yeun-Jun Yonsei Med J Original Article PURPOSE: Kawasaki disease (KD) is a mucocutaneous lymph node syndrome. It is mainly seen in young children under the age of five. KD is a multifactorial disorder that includes genetic variants. The present study investigated the association between KD and single nucleotide polymorphisms (SNPs) in the candidate gene early B cell factor 2 (EBF2), which is associated with inflammation markers. MATERIALS AND METHODS: An SNP analysis was performed by whole exon sequencing of the EBF2 gene. Our study comprised a total of 495 subjects (295 KD patients and 200 unrelated normal controls) from a Korean population. Tag SNPs were discovered using the Haploview program. Genotyping of the EBF2 gene was performed with the TaqMan® assay with real-time PCR methods. RESULTS: Polymorphism of rs10866845 showed a significant difference in allele frequency between KD patients and controls (p=0.040). The EBF2 gene polymorphisms were significantly associated with KD on logistic regression analysis. CONCLUSION: EBF2 gene variants can contribute to KD in the Korean population. Yonsei University College of Medicine 2018-06-01 2018-05-03 /pmc/articles/PMC5949294/ /pubmed/29749135 http://dx.doi.org/10.3349/ymj.2018.59.4.519 Text en © Copyright: Yonsei University College of Medicine 2018 http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Bae, Yoonsun
Shin, Dongjik
Nam, Jiho
Lee, Hye Rim
Kim, Jun Sung
Kim, Kyu Yeun
Kim, Dong Soo
Chung, Yeun-Jun
Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population
title Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population
title_full Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population
title_fullStr Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population
title_full_unstemmed Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population
title_short Variants in the Gene EBF2 Are Associated with Kawasaki Disease in a Korean Population
title_sort variants in the gene ebf2 are associated with kawasaki disease in a korean population
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949294/
https://www.ncbi.nlm.nih.gov/pubmed/29749135
http://dx.doi.org/10.3349/ymj.2018.59.4.519
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