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Potential mechanism and drug candidates for sepsis-induced acute lung injury
The present study aimed to explore the mechanisms underlying sepsis-induced acute lung injury (ALI) and identify more effective therapeutic strategies to treat it. The gene expression data set GSE10474 was downloaded and assessed to identify differentially expressed genes (DEGs). Principal component...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5952104/ https://www.ncbi.nlm.nih.gov/pubmed/29805488 http://dx.doi.org/10.3892/etm.2018.6001 |
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author | Xu, Chenyuan Guo, Zhengqiang Zhao, Chuncheng Zhang, Xufeng Wang, Zheng |
author_facet | Xu, Chenyuan Guo, Zhengqiang Zhao, Chuncheng Zhang, Xufeng Wang, Zheng |
author_sort | Xu, Chenyuan |
collection | PubMed |
description | The present study aimed to explore the mechanisms underlying sepsis-induced acute lung injury (ALI) and identify more effective therapeutic strategies to treat it. The gene expression data set GSE10474 was downloaded and assessed to identify differentially expressed genes (DEGs). Principal component analysis, functional enrichment analysis and differential co-expression analysis of DEGs were performed. Furthermore, potential target drugs for key DEGs were assessed. A total of 209 DEGs, including 107 upregulated and 102 downregulated genes were screened. A number of DEGs, including zinc finger and BTB domain containing 17 (ZBTB17), heat shock protein 90 kDa β, member 1 (HSP90B1) and major histocompatibility complex, class II, DR α were identified. Furthermore, gene ontology terms including antigen processing and presentation, glycerophospholipid metabolism, transcriptional misregulation in cancer, thyroid hormone synthesis and pathways associated with diseases, such as asthma were identified. In addition, a differential co-expression network containing ubiquitin-conjugating enzyme E2 D4, putative and tubulin, γ complex associated protein 3 was constructed. Furthermore, a number of gene-drug interactions, including between HSP90B1 and adenosine-5′-diphosphate and radicicol, were identified. Therefore, DEGs, including ZBTB17 and HSP90B1, may be important in the pathogenesis of sepsis-induced ALI. Furthermore, drugs including adenosine-5′-diphosphate may be novel drug candidates to treat patients with ALI. |
format | Online Article Text |
id | pubmed-5952104 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-59521042018-05-27 Potential mechanism and drug candidates for sepsis-induced acute lung injury Xu, Chenyuan Guo, Zhengqiang Zhao, Chuncheng Zhang, Xufeng Wang, Zheng Exp Ther Med Articles The present study aimed to explore the mechanisms underlying sepsis-induced acute lung injury (ALI) and identify more effective therapeutic strategies to treat it. The gene expression data set GSE10474 was downloaded and assessed to identify differentially expressed genes (DEGs). Principal component analysis, functional enrichment analysis and differential co-expression analysis of DEGs were performed. Furthermore, potential target drugs for key DEGs were assessed. A total of 209 DEGs, including 107 upregulated and 102 downregulated genes were screened. A number of DEGs, including zinc finger and BTB domain containing 17 (ZBTB17), heat shock protein 90 kDa β, member 1 (HSP90B1) and major histocompatibility complex, class II, DR α were identified. Furthermore, gene ontology terms including antigen processing and presentation, glycerophospholipid metabolism, transcriptional misregulation in cancer, thyroid hormone synthesis and pathways associated with diseases, such as asthma were identified. In addition, a differential co-expression network containing ubiquitin-conjugating enzyme E2 D4, putative and tubulin, γ complex associated protein 3 was constructed. Furthermore, a number of gene-drug interactions, including between HSP90B1 and adenosine-5′-diphosphate and radicicol, were identified. Therefore, DEGs, including ZBTB17 and HSP90B1, may be important in the pathogenesis of sepsis-induced ALI. Furthermore, drugs including adenosine-5′-diphosphate may be novel drug candidates to treat patients with ALI. D.A. Spandidos 2018-06 2018-03-28 /pmc/articles/PMC5952104/ /pubmed/29805488 http://dx.doi.org/10.3892/etm.2018.6001 Text en Copyright: © Xu et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Xu, Chenyuan Guo, Zhengqiang Zhao, Chuncheng Zhang, Xufeng Wang, Zheng Potential mechanism and drug candidates for sepsis-induced acute lung injury |
title | Potential mechanism and drug candidates for sepsis-induced acute lung injury |
title_full | Potential mechanism and drug candidates for sepsis-induced acute lung injury |
title_fullStr | Potential mechanism and drug candidates for sepsis-induced acute lung injury |
title_full_unstemmed | Potential mechanism and drug candidates for sepsis-induced acute lung injury |
title_short | Potential mechanism and drug candidates for sepsis-induced acute lung injury |
title_sort | potential mechanism and drug candidates for sepsis-induced acute lung injury |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5952104/ https://www.ncbi.nlm.nih.gov/pubmed/29805488 http://dx.doi.org/10.3892/etm.2018.6001 |
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