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Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment

Aging is closely connected with death, progressive physiological decline, and increased risk of diseases, such as cancer, arteriosclerosis, heart disease, hypertension, and neurodegenerative diseases. It is reported that moxibustion can treat more than 300 kinds of diseases including aging related p...

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Autores principales: Liu, Nan, Jiang, Yunyao, Xing, Min, Zhao, Baixiao, Hou, Jincai, Lim, Minyee, Huang, Jian, Luo, Xue, Han, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5954890/
https://www.ncbi.nlm.nih.gov/pubmed/29853953
http://dx.doi.org/10.1155/2018/4767328
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author Liu, Nan
Jiang, Yunyao
Xing, Min
Zhao, Baixiao
Hou, Jincai
Lim, Minyee
Huang, Jian
Luo, Xue
Han, Li
author_facet Liu, Nan
Jiang, Yunyao
Xing, Min
Zhao, Baixiao
Hou, Jincai
Lim, Minyee
Huang, Jian
Luo, Xue
Han, Li
author_sort Liu, Nan
collection PubMed
description Aging is closely connected with death, progressive physiological decline, and increased risk of diseases, such as cancer, arteriosclerosis, heart disease, hypertension, and neurodegenerative diseases. It is reported that moxibustion can treat more than 300 kinds of diseases including aging related problems and can improve immune function and physiological functions. The digital gene expression profiling of aged mice with or without moxibustion treatment was investigated and the mechanisms of moxibustion in aged mice were speculated by gene ontology and pathway analysis in the study. Almost 145 million raw reads were obtained by digital gene expression analysis and about 140 million (96.55%) were clean reads. Five differentially expressed genes with an adjusted P value < 0.05 and |log⁡2(fold  change)| > 1 were identified between the control and moxibustion groups. They were Gm6563, Gm8116, Rps26-ps1, Nat8f4, and Igkv3-12. Gene ontology analysis was carried out by the GOseq R package and functional annotations of the differentially expressed genes related to translation, mRNA export from nucleus, mRNA transport, nuclear body, acetyltransferase activity, and so on. Kyoto Encyclopedia of Genes and Genomes database was used for pathway analysis and ribosome was the most significantly enriched pathway term.
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spelling pubmed-59548902018-05-31 Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment Liu, Nan Jiang, Yunyao Xing, Min Zhao, Baixiao Hou, Jincai Lim, Minyee Huang, Jian Luo, Xue Han, Li Evid Based Complement Alternat Med Research Article Aging is closely connected with death, progressive physiological decline, and increased risk of diseases, such as cancer, arteriosclerosis, heart disease, hypertension, and neurodegenerative diseases. It is reported that moxibustion can treat more than 300 kinds of diseases including aging related problems and can improve immune function and physiological functions. The digital gene expression profiling of aged mice with or without moxibustion treatment was investigated and the mechanisms of moxibustion in aged mice were speculated by gene ontology and pathway analysis in the study. Almost 145 million raw reads were obtained by digital gene expression analysis and about 140 million (96.55%) were clean reads. Five differentially expressed genes with an adjusted P value < 0.05 and |log⁡2(fold  change)| > 1 were identified between the control and moxibustion groups. They were Gm6563, Gm8116, Rps26-ps1, Nat8f4, and Igkv3-12. Gene ontology analysis was carried out by the GOseq R package and functional annotations of the differentially expressed genes related to translation, mRNA export from nucleus, mRNA transport, nuclear body, acetyltransferase activity, and so on. Kyoto Encyclopedia of Genes and Genomes database was used for pathway analysis and ribosome was the most significantly enriched pathway term. Hindawi 2018-05-02 /pmc/articles/PMC5954890/ /pubmed/29853953 http://dx.doi.org/10.1155/2018/4767328 Text en Copyright © 2018 Nan Liu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Liu, Nan
Jiang, Yunyao
Xing, Min
Zhao, Baixiao
Hou, Jincai
Lim, Minyee
Huang, Jian
Luo, Xue
Han, Li
Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment
title Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment
title_full Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment
title_fullStr Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment
title_full_unstemmed Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment
title_short Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment
title_sort digital gene expression profiling analysis of aged mice under moxibustion treatment
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5954890/
https://www.ncbi.nlm.nih.gov/pubmed/29853953
http://dx.doi.org/10.1155/2018/4767328
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