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Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment
Aging is closely connected with death, progressive physiological decline, and increased risk of diseases, such as cancer, arteriosclerosis, heart disease, hypertension, and neurodegenerative diseases. It is reported that moxibustion can treat more than 300 kinds of diseases including aging related p...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5954890/ https://www.ncbi.nlm.nih.gov/pubmed/29853953 http://dx.doi.org/10.1155/2018/4767328 |
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author | Liu, Nan Jiang, Yunyao Xing, Min Zhao, Baixiao Hou, Jincai Lim, Minyee Huang, Jian Luo, Xue Han, Li |
author_facet | Liu, Nan Jiang, Yunyao Xing, Min Zhao, Baixiao Hou, Jincai Lim, Minyee Huang, Jian Luo, Xue Han, Li |
author_sort | Liu, Nan |
collection | PubMed |
description | Aging is closely connected with death, progressive physiological decline, and increased risk of diseases, such as cancer, arteriosclerosis, heart disease, hypertension, and neurodegenerative diseases. It is reported that moxibustion can treat more than 300 kinds of diseases including aging related problems and can improve immune function and physiological functions. The digital gene expression profiling of aged mice with or without moxibustion treatment was investigated and the mechanisms of moxibustion in aged mice were speculated by gene ontology and pathway analysis in the study. Almost 145 million raw reads were obtained by digital gene expression analysis and about 140 million (96.55%) were clean reads. Five differentially expressed genes with an adjusted P value < 0.05 and |log2(fold change)| > 1 were identified between the control and moxibustion groups. They were Gm6563, Gm8116, Rps26-ps1, Nat8f4, and Igkv3-12. Gene ontology analysis was carried out by the GOseq R package and functional annotations of the differentially expressed genes related to translation, mRNA export from nucleus, mRNA transport, nuclear body, acetyltransferase activity, and so on. Kyoto Encyclopedia of Genes and Genomes database was used for pathway analysis and ribosome was the most significantly enriched pathway term. |
format | Online Article Text |
id | pubmed-5954890 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-59548902018-05-31 Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment Liu, Nan Jiang, Yunyao Xing, Min Zhao, Baixiao Hou, Jincai Lim, Minyee Huang, Jian Luo, Xue Han, Li Evid Based Complement Alternat Med Research Article Aging is closely connected with death, progressive physiological decline, and increased risk of diseases, such as cancer, arteriosclerosis, heart disease, hypertension, and neurodegenerative diseases. It is reported that moxibustion can treat more than 300 kinds of diseases including aging related problems and can improve immune function and physiological functions. The digital gene expression profiling of aged mice with or without moxibustion treatment was investigated and the mechanisms of moxibustion in aged mice were speculated by gene ontology and pathway analysis in the study. Almost 145 million raw reads were obtained by digital gene expression analysis and about 140 million (96.55%) were clean reads. Five differentially expressed genes with an adjusted P value < 0.05 and |log2(fold change)| > 1 were identified between the control and moxibustion groups. They were Gm6563, Gm8116, Rps26-ps1, Nat8f4, and Igkv3-12. Gene ontology analysis was carried out by the GOseq R package and functional annotations of the differentially expressed genes related to translation, mRNA export from nucleus, mRNA transport, nuclear body, acetyltransferase activity, and so on. Kyoto Encyclopedia of Genes and Genomes database was used for pathway analysis and ribosome was the most significantly enriched pathway term. Hindawi 2018-05-02 /pmc/articles/PMC5954890/ /pubmed/29853953 http://dx.doi.org/10.1155/2018/4767328 Text en Copyright © 2018 Nan Liu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Liu, Nan Jiang, Yunyao Xing, Min Zhao, Baixiao Hou, Jincai Lim, Minyee Huang, Jian Luo, Xue Han, Li Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment |
title | Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment |
title_full | Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment |
title_fullStr | Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment |
title_full_unstemmed | Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment |
title_short | Digital Gene Expression Profiling Analysis of Aged Mice under Moxibustion Treatment |
title_sort | digital gene expression profiling analysis of aged mice under moxibustion treatment |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5954890/ https://www.ncbi.nlm.nih.gov/pubmed/29853953 http://dx.doi.org/10.1155/2018/4767328 |
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