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Automated and real-time segmentation of suspicious breast masses using convolutional neural network
In this work, a computer-aided tool for detection was developed to segment breast masses from clinical ultrasound (US) scans. The underlying Multi U-net algorithm is based on convolutional neural networks. Under the Mayo Clinic Institutional Review Board protocol, a prospective study of the automati...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5955504/ https://www.ncbi.nlm.nih.gov/pubmed/29768415 http://dx.doi.org/10.1371/journal.pone.0195816 |
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author | Kumar, Viksit Webb, Jeremy M. Gregory, Adriana Denis, Max Meixner, Duane D. Bayat, Mahdi Whaley, Dana H. Fatemi, Mostafa Alizad, Azra |
author_facet | Kumar, Viksit Webb, Jeremy M. Gregory, Adriana Denis, Max Meixner, Duane D. Bayat, Mahdi Whaley, Dana H. Fatemi, Mostafa Alizad, Azra |
author_sort | Kumar, Viksit |
collection | PubMed |
description | In this work, a computer-aided tool for detection was developed to segment breast masses from clinical ultrasound (US) scans. The underlying Multi U-net algorithm is based on convolutional neural networks. Under the Mayo Clinic Institutional Review Board protocol, a prospective study of the automatic segmentation of suspicious breast masses was performed. The cohort consisted of 258 female patients who were clinically identified with suspicious breast masses and underwent clinical US scan and breast biopsy. The computer-aided detection tool effectively segmented the breast masses, achieving a mean Dice coefficient of 0.82, a true positive fraction (TPF) of 0.84, and a false positive fraction (FPF) of 0.01. By avoiding positioning of an initial seed, the algorithm is able to segment images in real time (13–55 ms per image), and can have potential clinical applications. The algorithm is at par with a conventional seeded algorithm, which had a mean Dice coefficient of 0.84 and performs significantly better (P< 0.0001) than the original U-net algorithm. |
format | Online Article Text |
id | pubmed-5955504 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-59555042018-05-25 Automated and real-time segmentation of suspicious breast masses using convolutional neural network Kumar, Viksit Webb, Jeremy M. Gregory, Adriana Denis, Max Meixner, Duane D. Bayat, Mahdi Whaley, Dana H. Fatemi, Mostafa Alizad, Azra PLoS One Research Article In this work, a computer-aided tool for detection was developed to segment breast masses from clinical ultrasound (US) scans. The underlying Multi U-net algorithm is based on convolutional neural networks. Under the Mayo Clinic Institutional Review Board protocol, a prospective study of the automatic segmentation of suspicious breast masses was performed. The cohort consisted of 258 female patients who were clinically identified with suspicious breast masses and underwent clinical US scan and breast biopsy. The computer-aided detection tool effectively segmented the breast masses, achieving a mean Dice coefficient of 0.82, a true positive fraction (TPF) of 0.84, and a false positive fraction (FPF) of 0.01. By avoiding positioning of an initial seed, the algorithm is able to segment images in real time (13–55 ms per image), and can have potential clinical applications. The algorithm is at par with a conventional seeded algorithm, which had a mean Dice coefficient of 0.84 and performs significantly better (P< 0.0001) than the original U-net algorithm. Public Library of Science 2018-05-16 /pmc/articles/PMC5955504/ /pubmed/29768415 http://dx.doi.org/10.1371/journal.pone.0195816 Text en © 2018 Kumar et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Kumar, Viksit Webb, Jeremy M. Gregory, Adriana Denis, Max Meixner, Duane D. Bayat, Mahdi Whaley, Dana H. Fatemi, Mostafa Alizad, Azra Automated and real-time segmentation of suspicious breast masses using convolutional neural network |
title | Automated and real-time segmentation of suspicious breast masses using convolutional neural network |
title_full | Automated and real-time segmentation of suspicious breast masses using convolutional neural network |
title_fullStr | Automated and real-time segmentation of suspicious breast masses using convolutional neural network |
title_full_unstemmed | Automated and real-time segmentation of suspicious breast masses using convolutional neural network |
title_short | Automated and real-time segmentation of suspicious breast masses using convolutional neural network |
title_sort | automated and real-time segmentation of suspicious breast masses using convolutional neural network |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5955504/ https://www.ncbi.nlm.nih.gov/pubmed/29768415 http://dx.doi.org/10.1371/journal.pone.0195816 |
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