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Automated and real-time segmentation of suspicious breast masses using convolutional neural network

In this work, a computer-aided tool for detection was developed to segment breast masses from clinical ultrasound (US) scans. The underlying Multi U-net algorithm is based on convolutional neural networks. Under the Mayo Clinic Institutional Review Board protocol, a prospective study of the automati...

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Detalles Bibliográficos
Autores principales: Kumar, Viksit, Webb, Jeremy M., Gregory, Adriana, Denis, Max, Meixner, Duane D., Bayat, Mahdi, Whaley, Dana H., Fatemi, Mostafa, Alizad, Azra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5955504/
https://www.ncbi.nlm.nih.gov/pubmed/29768415
http://dx.doi.org/10.1371/journal.pone.0195816
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author Kumar, Viksit
Webb, Jeremy M.
Gregory, Adriana
Denis, Max
Meixner, Duane D.
Bayat, Mahdi
Whaley, Dana H.
Fatemi, Mostafa
Alizad, Azra
author_facet Kumar, Viksit
Webb, Jeremy M.
Gregory, Adriana
Denis, Max
Meixner, Duane D.
Bayat, Mahdi
Whaley, Dana H.
Fatemi, Mostafa
Alizad, Azra
author_sort Kumar, Viksit
collection PubMed
description In this work, a computer-aided tool for detection was developed to segment breast masses from clinical ultrasound (US) scans. The underlying Multi U-net algorithm is based on convolutional neural networks. Under the Mayo Clinic Institutional Review Board protocol, a prospective study of the automatic segmentation of suspicious breast masses was performed. The cohort consisted of 258 female patients who were clinically identified with suspicious breast masses and underwent clinical US scan and breast biopsy. The computer-aided detection tool effectively segmented the breast masses, achieving a mean Dice coefficient of 0.82, a true positive fraction (TPF) of 0.84, and a false positive fraction (FPF) of 0.01. By avoiding positioning of an initial seed, the algorithm is able to segment images in real time (13–55 ms per image), and can have potential clinical applications. The algorithm is at par with a conventional seeded algorithm, which had a mean Dice coefficient of 0.84 and performs significantly better (P< 0.0001) than the original U-net algorithm.
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spelling pubmed-59555042018-05-25 Automated and real-time segmentation of suspicious breast masses using convolutional neural network Kumar, Viksit Webb, Jeremy M. Gregory, Adriana Denis, Max Meixner, Duane D. Bayat, Mahdi Whaley, Dana H. Fatemi, Mostafa Alizad, Azra PLoS One Research Article In this work, a computer-aided tool for detection was developed to segment breast masses from clinical ultrasound (US) scans. The underlying Multi U-net algorithm is based on convolutional neural networks. Under the Mayo Clinic Institutional Review Board protocol, a prospective study of the automatic segmentation of suspicious breast masses was performed. The cohort consisted of 258 female patients who were clinically identified with suspicious breast masses and underwent clinical US scan and breast biopsy. The computer-aided detection tool effectively segmented the breast masses, achieving a mean Dice coefficient of 0.82, a true positive fraction (TPF) of 0.84, and a false positive fraction (FPF) of 0.01. By avoiding positioning of an initial seed, the algorithm is able to segment images in real time (13–55 ms per image), and can have potential clinical applications. The algorithm is at par with a conventional seeded algorithm, which had a mean Dice coefficient of 0.84 and performs significantly better (P< 0.0001) than the original U-net algorithm. Public Library of Science 2018-05-16 /pmc/articles/PMC5955504/ /pubmed/29768415 http://dx.doi.org/10.1371/journal.pone.0195816 Text en © 2018 Kumar et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kumar, Viksit
Webb, Jeremy M.
Gregory, Adriana
Denis, Max
Meixner, Duane D.
Bayat, Mahdi
Whaley, Dana H.
Fatemi, Mostafa
Alizad, Azra
Automated and real-time segmentation of suspicious breast masses using convolutional neural network
title Automated and real-time segmentation of suspicious breast masses using convolutional neural network
title_full Automated and real-time segmentation of suspicious breast masses using convolutional neural network
title_fullStr Automated and real-time segmentation of suspicious breast masses using convolutional neural network
title_full_unstemmed Automated and real-time segmentation of suspicious breast masses using convolutional neural network
title_short Automated and real-time segmentation of suspicious breast masses using convolutional neural network
title_sort automated and real-time segmentation of suspicious breast masses using convolutional neural network
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5955504/
https://www.ncbi.nlm.nih.gov/pubmed/29768415
http://dx.doi.org/10.1371/journal.pone.0195816
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