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Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism
Under nitrogen deprivation, the one-dimensional cyanobacterial organism Anabaena sp. PCC 7120 develops patterns of single, nitrogen-fixing cells separated by nearly regular intervals of photosynthetic vegetative cells. We study a minimal, stochastic model of developmental patterns in Anabaena that i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5955598/ https://www.ncbi.nlm.nih.gov/pubmed/29727442 http://dx.doi.org/10.1371/journal.pbio.2004877 |
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author | Di Patti, Francesca Lavacchi, Laura Arbel-Goren, Rinat Schein-Lubomirsky, Leora Fanelli, Duccio Stavans, Joel |
author_facet | Di Patti, Francesca Lavacchi, Laura Arbel-Goren, Rinat Schein-Lubomirsky, Leora Fanelli, Duccio Stavans, Joel |
author_sort | Di Patti, Francesca |
collection | PubMed |
description | Under nitrogen deprivation, the one-dimensional cyanobacterial organism Anabaena sp. PCC 7120 develops patterns of single, nitrogen-fixing cells separated by nearly regular intervals of photosynthetic vegetative cells. We study a minimal, stochastic model of developmental patterns in Anabaena that includes a nondiffusing activator, two diffusing inhibitor morphogens, demographic fluctuations in the number of morphogen molecules, and filament growth. By tracking developing filaments, we provide experimental evidence for different spatiotemporal roles of the two inhibitors during pattern maintenance and for small molecular copy numbers, justifying a stochastic approach. In the deterministic limit, the model yields Turing patterns within a region of parameter space that shrinks markedly as the inhibitor diffusivities become equal. Transient, noise-driven, stochastic Turing patterns are produced outside this region, which can then be fixed by downstream genetic commitment pathways, dramatically enhancing the robustness of pattern formation, also in the biologically relevant situation in which the inhibitors' diffusivities may be comparable. |
format | Online Article Text |
id | pubmed-5955598 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-59555982018-05-25 Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism Di Patti, Francesca Lavacchi, Laura Arbel-Goren, Rinat Schein-Lubomirsky, Leora Fanelli, Duccio Stavans, Joel PLoS Biol Research Article Under nitrogen deprivation, the one-dimensional cyanobacterial organism Anabaena sp. PCC 7120 develops patterns of single, nitrogen-fixing cells separated by nearly regular intervals of photosynthetic vegetative cells. We study a minimal, stochastic model of developmental patterns in Anabaena that includes a nondiffusing activator, two diffusing inhibitor morphogens, demographic fluctuations in the number of morphogen molecules, and filament growth. By tracking developing filaments, we provide experimental evidence for different spatiotemporal roles of the two inhibitors during pattern maintenance and for small molecular copy numbers, justifying a stochastic approach. In the deterministic limit, the model yields Turing patterns within a region of parameter space that shrinks markedly as the inhibitor diffusivities become equal. Transient, noise-driven, stochastic Turing patterns are produced outside this region, which can then be fixed by downstream genetic commitment pathways, dramatically enhancing the robustness of pattern formation, also in the biologically relevant situation in which the inhibitors' diffusivities may be comparable. Public Library of Science 2018-05-04 /pmc/articles/PMC5955598/ /pubmed/29727442 http://dx.doi.org/10.1371/journal.pbio.2004877 Text en © 2018 Di Patti et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Di Patti, Francesca Lavacchi, Laura Arbel-Goren, Rinat Schein-Lubomirsky, Leora Fanelli, Duccio Stavans, Joel Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism |
title | Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism |
title_full | Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism |
title_fullStr | Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism |
title_full_unstemmed | Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism |
title_short | Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism |
title_sort | robust stochastic turing patterns in the development of a one-dimensional cyanobacterial organism |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5955598/ https://www.ncbi.nlm.nih.gov/pubmed/29727442 http://dx.doi.org/10.1371/journal.pbio.2004877 |
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