Cargando…

Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study

PURPOSE: Hepatocellular carcinoma (HCC) results from chronic inflammation/cirrhosis. Unfortunately, despite use of radiological/serological screening techniques, HCC ranks as a leading cause of cancer deaths. Our group has used alterations in high order chromatin as a marker for field carcinogenesis...

Descripción completa

Detalles Bibliográficos
Autores principales: Kalman, Richard, Stawarz, Andrew, Nunes, David, Zhang, Di, Dela Cruz, Mart A., Mohanty, Arpan, Subramanian, Hariharan, Backman, Vadim, Roy, Hemant K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5957523/
https://www.ncbi.nlm.nih.gov/pubmed/29771950
http://dx.doi.org/10.1371/journal.pone.0197427
_version_ 1783324076695093248
author Kalman, Richard
Stawarz, Andrew
Nunes, David
Zhang, Di
Dela Cruz, Mart A.
Mohanty, Arpan
Subramanian, Hariharan
Backman, Vadim
Roy, Hemant K.
author_facet Kalman, Richard
Stawarz, Andrew
Nunes, David
Zhang, Di
Dela Cruz, Mart A.
Mohanty, Arpan
Subramanian, Hariharan
Backman, Vadim
Roy, Hemant K.
author_sort Kalman, Richard
collection PubMed
description PURPOSE: Hepatocellular carcinoma (HCC) results from chronic inflammation/cirrhosis. Unfortunately, despite use of radiological/serological screening techniques, HCC ranks as a leading cause of cancer deaths. Our group has used alterations in high order chromatin as a marker for field carcinogenesis and hence risk for a variety of cancers (including colon, lung, prostate, ovarian, esophageal). In this study we wanted to address whether these chromatin alterations occur in HCC and if it could be used for risk stratification. EXPERIMENTAL DESIGN: A case control study was performed in patients with cirrhosis who went on to develop HCC and patients with cirrhosis who did not develop cancer. We performed partial wave spectroscopic microscopy (PWS) which measures nanoscale alterations on formalin fixed deparaffinized liver biopsy specimens, 17 progressors and 26 non-progressors. Follow up was 2089 and 2892 days, respectively. RESULTS: PWS parameter disorder strength L(d) were notably higher for the progressors (L(d) = 1.47 ± 0.76) than the non-progressors (L(d) = 1.00 ± 0.27) (p = 0.024). Overall, the Cohen’s d effect size was 0.907 (90.7%). AUROC analysis yielded an area of 0.70. There was no evidence of confounding by gender, age, BMI, smoking status and race. CONCLUSIONS: High order chromatin alterations, as detected by PWS, is altered in pre-malignant hepatocytes with cirrhosis and may predict future risk of HCC.
format Online
Article
Text
id pubmed-5957523
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-59575232018-05-31 Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study Kalman, Richard Stawarz, Andrew Nunes, David Zhang, Di Dela Cruz, Mart A. Mohanty, Arpan Subramanian, Hariharan Backman, Vadim Roy, Hemant K. PLoS One Research Article PURPOSE: Hepatocellular carcinoma (HCC) results from chronic inflammation/cirrhosis. Unfortunately, despite use of radiological/serological screening techniques, HCC ranks as a leading cause of cancer deaths. Our group has used alterations in high order chromatin as a marker for field carcinogenesis and hence risk for a variety of cancers (including colon, lung, prostate, ovarian, esophageal). In this study we wanted to address whether these chromatin alterations occur in HCC and if it could be used for risk stratification. EXPERIMENTAL DESIGN: A case control study was performed in patients with cirrhosis who went on to develop HCC and patients with cirrhosis who did not develop cancer. We performed partial wave spectroscopic microscopy (PWS) which measures nanoscale alterations on formalin fixed deparaffinized liver biopsy specimens, 17 progressors and 26 non-progressors. Follow up was 2089 and 2892 days, respectively. RESULTS: PWS parameter disorder strength L(d) were notably higher for the progressors (L(d) = 1.47 ± 0.76) than the non-progressors (L(d) = 1.00 ± 0.27) (p = 0.024). Overall, the Cohen’s d effect size was 0.907 (90.7%). AUROC analysis yielded an area of 0.70. There was no evidence of confounding by gender, age, BMI, smoking status and race. CONCLUSIONS: High order chromatin alterations, as detected by PWS, is altered in pre-malignant hepatocytes with cirrhosis and may predict future risk of HCC. Public Library of Science 2018-05-17 /pmc/articles/PMC5957523/ /pubmed/29771950 http://dx.doi.org/10.1371/journal.pone.0197427 Text en © 2018 Kalman et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kalman, Richard
Stawarz, Andrew
Nunes, David
Zhang, Di
Dela Cruz, Mart A.
Mohanty, Arpan
Subramanian, Hariharan
Backman, Vadim
Roy, Hemant K.
Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study
title Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study
title_full Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study
title_fullStr Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study
title_full_unstemmed Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study
title_short Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study
title_sort biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: a pilot study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5957523/
https://www.ncbi.nlm.nih.gov/pubmed/29771950
http://dx.doi.org/10.1371/journal.pone.0197427
work_keys_str_mv AT kalmanrichard biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT stawarzandrew biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT nunesdavid biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT zhangdi biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT delacruzmarta biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT mohantyarpan biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT subramanianhariharan biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT backmanvadim biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy
AT royhemantk biophotonicdetectionofhighorderchromatinalterationsinfieldcarcinogenesispredictsriskoffuturehepatocellularcarcinomaapilotstudy