Cargando…

The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL

The core α1–6 fucosylation-specific lectin from a mushroom Pholiota squarrosa (PhoSL) is a potential tool for precise diagnosis of cancers. This lectin consists of only 40 amino acids and can be chemically synthesized. We showed here that a synthesized PhoSL peptide formed a trimer by gel filtration...

Descripción completa

Detalles Bibliográficos
Autores principales: Yamasaki, Kazuhiko, Yamasaki, Tomoko, Tateno, Hiroaki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5958098/
https://www.ncbi.nlm.nih.gov/pubmed/29773815
http://dx.doi.org/10.1038/s41598-018-25630-2
_version_ 1783324179391578112
author Yamasaki, Kazuhiko
Yamasaki, Tomoko
Tateno, Hiroaki
author_facet Yamasaki, Kazuhiko
Yamasaki, Tomoko
Tateno, Hiroaki
author_sort Yamasaki, Kazuhiko
collection PubMed
description The core α1–6 fucosylation-specific lectin from a mushroom Pholiota squarrosa (PhoSL) is a potential tool for precise diagnosis of cancers. This lectin consists of only 40 amino acids and can be chemically synthesized. We showed here that a synthesized PhoSL peptide formed a trimer by gel filtration and chemical cross-linking assays, and determined a structure of the PhoSL trimer by NMR. The structure possesses a β-prism motif with a three-fold rotational symmetry, where three antiparallel β-sheets are tightly connected by swapping of β-strands. A triad of Trp residues comprises the structural core, forming NH–π electrostatic interactions among the indole rings. NMR analysis with an excess amount of fucose revealed the structural basis for the molecular recognition. Namely, fucose deeply enters a pocket formed at a junction of β-sheet edges, with the methyl group placed at the bottom. It forms a number of hydrophobic and hydrogen-bonding interactions with PhoSL residues. In spite of partial similarities to the structures of other functionally related lectins, the arrangement of the antiparallel β-sheets in the PhoSL trimer is novel as a structural scaffold, and thus defines a novel type of lectin structure.
format Online
Article
Text
id pubmed-5958098
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-59580982018-05-24 The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL Yamasaki, Kazuhiko Yamasaki, Tomoko Tateno, Hiroaki Sci Rep Article The core α1–6 fucosylation-specific lectin from a mushroom Pholiota squarrosa (PhoSL) is a potential tool for precise diagnosis of cancers. This lectin consists of only 40 amino acids and can be chemically synthesized. We showed here that a synthesized PhoSL peptide formed a trimer by gel filtration and chemical cross-linking assays, and determined a structure of the PhoSL trimer by NMR. The structure possesses a β-prism motif with a three-fold rotational symmetry, where three antiparallel β-sheets are tightly connected by swapping of β-strands. A triad of Trp residues comprises the structural core, forming NH–π electrostatic interactions among the indole rings. NMR analysis with an excess amount of fucose revealed the structural basis for the molecular recognition. Namely, fucose deeply enters a pocket formed at a junction of β-sheet edges, with the methyl group placed at the bottom. It forms a number of hydrophobic and hydrogen-bonding interactions with PhoSL residues. In spite of partial similarities to the structures of other functionally related lectins, the arrangement of the antiparallel β-sheets in the PhoSL trimer is novel as a structural scaffold, and thus defines a novel type of lectin structure. Nature Publishing Group UK 2018-05-17 /pmc/articles/PMC5958098/ /pubmed/29773815 http://dx.doi.org/10.1038/s41598-018-25630-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Yamasaki, Kazuhiko
Yamasaki, Tomoko
Tateno, Hiroaki
The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL
title The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL
title_full The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL
title_fullStr The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL
title_full_unstemmed The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL
title_short The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL
title_sort trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin phosl
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5958098/
https://www.ncbi.nlm.nih.gov/pubmed/29773815
http://dx.doi.org/10.1038/s41598-018-25630-2
work_keys_str_mv AT yamasakikazuhiko thetrimericsolutionstructureandfucosebindingmechanismofthecorefucosylationspecificlectinphosl
AT yamasakitomoko thetrimericsolutionstructureandfucosebindingmechanismofthecorefucosylationspecificlectinphosl
AT tatenohiroaki thetrimericsolutionstructureandfucosebindingmechanismofthecorefucosylationspecificlectinphosl
AT yamasakikazuhiko trimericsolutionstructureandfucosebindingmechanismofthecorefucosylationspecificlectinphosl
AT yamasakitomoko trimericsolutionstructureandfucosebindingmechanismofthecorefucosylationspecificlectinphosl
AT tatenohiroaki trimericsolutionstructureandfucosebindingmechanismofthecorefucosylationspecificlectinphosl