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Development of an Algorithm to Identify Patients with Physician-Documented Insomnia

We developed an insomnia classification algorithm by interrogating an electronic medical records (EMR) database of 314,292 patients. The patients received care at Massachusetts General Hospital (MGH), Brigham and Women’s Hospital (BWH), or both, between 1992 and 2010. Our algorithm combined structur...

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Autores principales: Kartoun, Uri, Aggarwal, Rahul, Beam, Andrew L., Pai, Jennifer K., Chatterjee, Arnaub K., Fitzgerald, Timothy P., Kohane, Isaac S., Shaw, Stanley Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5959894/
https://www.ncbi.nlm.nih.gov/pubmed/29777125
http://dx.doi.org/10.1038/s41598-018-25312-z
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author Kartoun, Uri
Aggarwal, Rahul
Beam, Andrew L.
Pai, Jennifer K.
Chatterjee, Arnaub K.
Fitzgerald, Timothy P.
Kohane, Isaac S.
Shaw, Stanley Y.
author_facet Kartoun, Uri
Aggarwal, Rahul
Beam, Andrew L.
Pai, Jennifer K.
Chatterjee, Arnaub K.
Fitzgerald, Timothy P.
Kohane, Isaac S.
Shaw, Stanley Y.
author_sort Kartoun, Uri
collection PubMed
description We developed an insomnia classification algorithm by interrogating an electronic medical records (EMR) database of 314,292 patients. The patients received care at Massachusetts General Hospital (MGH), Brigham and Women’s Hospital (BWH), or both, between 1992 and 2010. Our algorithm combined structured variables (such as International Classification of Diseases 9th Revision [ICD-9] codes, prescriptions, laboratory observations) and unstructured variables (such as text mentions of sleep and psychiatric disorders in clinical narrative notes). The highest classification performance of our algorithm was achieved when it included a combination of structured variables (billing codes for insomnia, common psychiatric conditions, and joint disorders) and unstructured variables (sleep disorders and psychiatric disorders). Our algorithm had superior performance in identifying insomnia patients compared to billing codes alone (area under the receiver operating characteristic curve [AUROC] = 0.83 vs. 0.55 with 95% confidence intervals [CI] of 0.76–0.90 and 0.51–0.58, respectively). When applied to the 314,292-patient population, our algorithm classified 36,810 of the patients with insomnia, of which less than 17% had a billing code for insomnia. In conclusion, an insomnia classification algorithm that incorporates clinical notes is superior to one based solely on billing codes. Compared to traditional methods, our study demonstrates that a classification algorithm that incorporates physician notes can more accurately, comprehensively, and quickly identify large cohorts of insomnia patients.
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spelling pubmed-59598942018-05-24 Development of an Algorithm to Identify Patients with Physician-Documented Insomnia Kartoun, Uri Aggarwal, Rahul Beam, Andrew L. Pai, Jennifer K. Chatterjee, Arnaub K. Fitzgerald, Timothy P. Kohane, Isaac S. Shaw, Stanley Y. Sci Rep Article We developed an insomnia classification algorithm by interrogating an electronic medical records (EMR) database of 314,292 patients. The patients received care at Massachusetts General Hospital (MGH), Brigham and Women’s Hospital (BWH), or both, between 1992 and 2010. Our algorithm combined structured variables (such as International Classification of Diseases 9th Revision [ICD-9] codes, prescriptions, laboratory observations) and unstructured variables (such as text mentions of sleep and psychiatric disorders in clinical narrative notes). The highest classification performance of our algorithm was achieved when it included a combination of structured variables (billing codes for insomnia, common psychiatric conditions, and joint disorders) and unstructured variables (sleep disorders and psychiatric disorders). Our algorithm had superior performance in identifying insomnia patients compared to billing codes alone (area under the receiver operating characteristic curve [AUROC] = 0.83 vs. 0.55 with 95% confidence intervals [CI] of 0.76–0.90 and 0.51–0.58, respectively). When applied to the 314,292-patient population, our algorithm classified 36,810 of the patients with insomnia, of which less than 17% had a billing code for insomnia. In conclusion, an insomnia classification algorithm that incorporates clinical notes is superior to one based solely on billing codes. Compared to traditional methods, our study demonstrates that a classification algorithm that incorporates physician notes can more accurately, comprehensively, and quickly identify large cohorts of insomnia patients. Nature Publishing Group UK 2018-05-18 /pmc/articles/PMC5959894/ /pubmed/29777125 http://dx.doi.org/10.1038/s41598-018-25312-z Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kartoun, Uri
Aggarwal, Rahul
Beam, Andrew L.
Pai, Jennifer K.
Chatterjee, Arnaub K.
Fitzgerald, Timothy P.
Kohane, Isaac S.
Shaw, Stanley Y.
Development of an Algorithm to Identify Patients with Physician-Documented Insomnia
title Development of an Algorithm to Identify Patients with Physician-Documented Insomnia
title_full Development of an Algorithm to Identify Patients with Physician-Documented Insomnia
title_fullStr Development of an Algorithm to Identify Patients with Physician-Documented Insomnia
title_full_unstemmed Development of an Algorithm to Identify Patients with Physician-Documented Insomnia
title_short Development of an Algorithm to Identify Patients with Physician-Documented Insomnia
title_sort development of an algorithm to identify patients with physician-documented insomnia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5959894/
https://www.ncbi.nlm.nih.gov/pubmed/29777125
http://dx.doi.org/10.1038/s41598-018-25312-z
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