Cargando…

Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol

INTRODUCTION: Asthma has a considerable, but potentially, avoidable burden on many populations globally. Scotland has some of the poorest health outcomes from asthma. Although ambient pollution, weather changes and sociodemographic factors have been associated with asthma attacks, it remains unclear...

Descripción completa

Detalles Bibliográficos
Autores principales: Soyiri, Ireneous N, Sheikh, Aziz, Reis, Stefan, Kavanagh, Kimberly, Vieno, Massimo, Clemens, Tom, Carnell, Edward J, Pan, Jiafeng, King, Abby, Beck, Rachel C, Ward, Hester J T, Dibben, Chris, Robertson, Chris, Simpson, Colin R
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961591/
https://www.ncbi.nlm.nih.gov/pubmed/29780034
http://dx.doi.org/10.1136/bmjopen-2018-023289
_version_ 1783324742858571776
author Soyiri, Ireneous N
Sheikh, Aziz
Reis, Stefan
Kavanagh, Kimberly
Vieno, Massimo
Clemens, Tom
Carnell, Edward J
Pan, Jiafeng
King, Abby
Beck, Rachel C
Ward, Hester J T
Dibben, Chris
Robertson, Chris
Simpson, Colin R
author_facet Soyiri, Ireneous N
Sheikh, Aziz
Reis, Stefan
Kavanagh, Kimberly
Vieno, Massimo
Clemens, Tom
Carnell, Edward J
Pan, Jiafeng
King, Abby
Beck, Rachel C
Ward, Hester J T
Dibben, Chris
Robertson, Chris
Simpson, Colin R
author_sort Soyiri, Ireneous N
collection PubMed
description INTRODUCTION: Asthma has a considerable, but potentially, avoidable burden on many populations globally. Scotland has some of the poorest health outcomes from asthma. Although ambient pollution, weather changes and sociodemographic factors have been associated with asthma attacks, it remains unclear whether modelled environment data and geospatial information can improve population-based asthma predictive algorithms. We aim to create the afferent loop of a national learning health system for asthma in Scotland. We will investigate the associations between ambient pollution, meteorological, geospatial and sociodemographic factors and asthma attacks. METHODS AND ANALYSIS: We will develop and implement a secured data governance and linkage framework to incorporate primary care health data, modelled environment data, geospatial population and sociodemographic data. Data from 75 recruited primary care practices (n=500 000 patients) in Scotland will be used. Modelled environment data on key air pollutants at a horizontal resolution of 5 km×5 km at hourly time steps will be generated using the EMEP4UK atmospheric chemistry transport modelling system for the datazones of the primary care practices’ populations. Scottish population census and education databases will be incorporated into the linkage framework for analysis. We will then undertake a longitudinal retrospective observational analysis. Asthma outcomes include asthma hospitalisations and oral steroid prescriptions. Using a nested case–control study design, associations between all covariates will be measured using conditional logistic regression to account for the matched design and to identify suitable predictors and potential candidate algorithms for an asthma learning health system in Scotland. Findings from this study will contribute to the development of predictive algorithms for asthma outcomes and be used to form the basis for our learning health system prototype. ETHICS AND DISSEMINATION: The study received National Health Service Research Ethics Committee approval (16/SS/0130) and also obtained permissions via the Public Benefit and Privacy Panel for Health and Social Care in Scotland to access, collate and use the following data sets: population and housing census for Scotland; Scottish education data via the Scottish Exchange of Data and primary care data from general practice Data Custodians. Analytic code will be made available in the open source GitHub website. The results of this study will be published in international peer reviewed journals.
format Online
Article
Text
id pubmed-5961591
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher BMJ Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-59615912018-05-30 Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol Soyiri, Ireneous N Sheikh, Aziz Reis, Stefan Kavanagh, Kimberly Vieno, Massimo Clemens, Tom Carnell, Edward J Pan, Jiafeng King, Abby Beck, Rachel C Ward, Hester J T Dibben, Chris Robertson, Chris Simpson, Colin R BMJ Open Respiratory Medicine INTRODUCTION: Asthma has a considerable, but potentially, avoidable burden on many populations globally. Scotland has some of the poorest health outcomes from asthma. Although ambient pollution, weather changes and sociodemographic factors have been associated with asthma attacks, it remains unclear whether modelled environment data and geospatial information can improve population-based asthma predictive algorithms. We aim to create the afferent loop of a national learning health system for asthma in Scotland. We will investigate the associations between ambient pollution, meteorological, geospatial and sociodemographic factors and asthma attacks. METHODS AND ANALYSIS: We will develop and implement a secured data governance and linkage framework to incorporate primary care health data, modelled environment data, geospatial population and sociodemographic data. Data from 75 recruited primary care practices (n=500 000 patients) in Scotland will be used. Modelled environment data on key air pollutants at a horizontal resolution of 5 km×5 km at hourly time steps will be generated using the EMEP4UK atmospheric chemistry transport modelling system for the datazones of the primary care practices’ populations. Scottish population census and education databases will be incorporated into the linkage framework for analysis. We will then undertake a longitudinal retrospective observational analysis. Asthma outcomes include asthma hospitalisations and oral steroid prescriptions. Using a nested case–control study design, associations between all covariates will be measured using conditional logistic regression to account for the matched design and to identify suitable predictors and potential candidate algorithms for an asthma learning health system in Scotland. Findings from this study will contribute to the development of predictive algorithms for asthma outcomes and be used to form the basis for our learning health system prototype. ETHICS AND DISSEMINATION: The study received National Health Service Research Ethics Committee approval (16/SS/0130) and also obtained permissions via the Public Benefit and Privacy Panel for Health and Social Care in Scotland to access, collate and use the following data sets: population and housing census for Scotland; Scottish education data via the Scottish Exchange of Data and primary care data from general practice Data Custodians. Analytic code will be made available in the open source GitHub website. The results of this study will be published in international peer reviewed journals. BMJ Publishing Group 2018-05-20 /pmc/articles/PMC5961591/ /pubmed/29780034 http://dx.doi.org/10.1136/bmjopen-2018-023289 Text en © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted. This is an Open Access article distributed in accordance with the terms of the Creative Commons Attribution (CC BY 4.0) license, which permits others to distribute, remix, adapt and build upon this work, for commercial use, provided the original work is properly cited. See: http://creativecommons.org/licenses/by/4.0/
spellingShingle Respiratory Medicine
Soyiri, Ireneous N
Sheikh, Aziz
Reis, Stefan
Kavanagh, Kimberly
Vieno, Massimo
Clemens, Tom
Carnell, Edward J
Pan, Jiafeng
King, Abby
Beck, Rachel C
Ward, Hester J T
Dibben, Chris
Robertson, Chris
Simpson, Colin R
Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol
title Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol
title_full Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol
title_fullStr Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol
title_full_unstemmed Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol
title_short Improving predictive asthma algorithms with modelled environment data for Scotland: an observational cohort study protocol
title_sort improving predictive asthma algorithms with modelled environment data for scotland: an observational cohort study protocol
topic Respiratory Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961591/
https://www.ncbi.nlm.nih.gov/pubmed/29780034
http://dx.doi.org/10.1136/bmjopen-2018-023289
work_keys_str_mv AT soyiriireneousn improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT sheikhaziz improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT reisstefan improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT kavanaghkimberly improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT vienomassimo improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT clemenstom improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT carnelledwardj improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT panjiafeng improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT kingabby improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT beckrachelc improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT wardhesterjt improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT dibbenchris improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT robertsonchris improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol
AT simpsoncolinr improvingpredictiveasthmaalgorithmswithmodelledenvironmentdataforscotlandanobservationalcohortstudyprotocol