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Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks

As medical science continues to advance, health care professionals and researchers are increasingly turning to clinical trials to obtain evidence supporting best-practice treatment options. While clinical trial registries such as Clinical-Trials.gov aim to facilitate these needs, it has been shown t...

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Detalles Bibliográficos
Autores principales: Goodwin, Travis R., Skinner, Michael A., Harabagiu, Sanda M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Informatics Association 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961767/
https://www.ncbi.nlm.nih.gov/pubmed/29888040
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author Goodwin, Travis R.
Skinner, Michael A.
Harabagiu, Sanda M.
author_facet Goodwin, Travis R.
Skinner, Michael A.
Harabagiu, Sanda M.
author_sort Goodwin, Travis R.
collection PubMed
description As medical science continues to advance, health care professionals and researchers are increasingly turning to clinical trials to obtain evidence supporting best-practice treatment options. While clinical trial registries such as Clinical-Trials.gov aim to facilitate these needs, it has been shown that many trials in the registry do not contain links to their published results. To address this problem, we present NCT Link, a system for automatically linking registered clinical trials to published MEDLINE articles reporting their results. NCT Link incorporates state-of-the-art deep learning and information retrieval techniques by automatically learning a Deep Highway Network (DHN) that estimates the likelihood that a MEDLINE article reports the results of a clinical trial. Our experimental results indicate that NCT Link obtains 30%-58% improved performance over previously reported automatic systems, suggesting that NCT Link could become a valuable tool for health care providers seeking to deliver best-practice medical care informed by evidence of clinical trials as well as (a) researchers investigating selective publication and reporting of clinical trial outcomes, and (b) study designers seeking to avoid unnecessary duplication of research efforts.
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spelling pubmed-59617672018-06-08 Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks Goodwin, Travis R. Skinner, Michael A. Harabagiu, Sanda M. AMIA Jt Summits Transl Sci Proc Articles As medical science continues to advance, health care professionals and researchers are increasingly turning to clinical trials to obtain evidence supporting best-practice treatment options. While clinical trial registries such as Clinical-Trials.gov aim to facilitate these needs, it has been shown that many trials in the registry do not contain links to their published results. To address this problem, we present NCT Link, a system for automatically linking registered clinical trials to published MEDLINE articles reporting their results. NCT Link incorporates state-of-the-art deep learning and information retrieval techniques by automatically learning a Deep Highway Network (DHN) that estimates the likelihood that a MEDLINE article reports the results of a clinical trial. Our experimental results indicate that NCT Link obtains 30%-58% improved performance over previously reported automatic systems, suggesting that NCT Link could become a valuable tool for health care providers seeking to deliver best-practice medical care informed by evidence of clinical trials as well as (a) researchers investigating selective publication and reporting of clinical trial outcomes, and (b) study designers seeking to avoid unnecessary duplication of research efforts. American Medical Informatics Association 2018-05-18 /pmc/articles/PMC5961767/ /pubmed/29888040 Text en ©2018 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
spellingShingle Articles
Goodwin, Travis R.
Skinner, Michael A.
Harabagiu, Sanda M.
Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks
title Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks
title_full Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks
title_fullStr Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks
title_full_unstemmed Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks
title_short Automatically Linking Registered Clinical Trials to their Published Results with Deep Highway Networks
title_sort automatically linking registered clinical trials to their published results with deep highway networks
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961767/
https://www.ncbi.nlm.nih.gov/pubmed/29888040
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