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A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy

Computer simulation is the only method available for evaluating vaccination policy for rare diseases or emergency use of new vaccines. The most realistic simulation of vaccination policy is agent-based simulation (ABS) in which agents have similar socio-demographic characteristics to a population of...

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Autores principales: Tajgardoon, Mohammadamin, Wagner, Michael M., Visweswara, Shyam, Zimmerman, Richard K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Informatics Association 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961808/
https://www.ncbi.nlm.nih.gov/pubmed/29888097
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author Tajgardoon, Mohammadamin
Wagner, Michael M.
Visweswara, Shyam
Zimmerman, Richard K.
author_facet Tajgardoon, Mohammadamin
Wagner, Michael M.
Visweswara, Shyam
Zimmerman, Richard K.
author_sort Tajgardoon, Mohammadamin
collection PubMed
description Computer simulation is the only method available for evaluating vaccination policy for rare diseases or emergency use of new vaccines. The most realistic simulation of vaccination policy is agent-based simulation (ABS) in which agents have similar socio-demographic characteristics to a population of interest. Currently, analysts use published information about vaccine efficacy (VE) as the probability that a vaccinated agent develops immunity; however, VE trials typically report only a single overall VE, or VE conditioned on one covariate (e.g., age). Thus, ABS’s potential to realistically simulate the effects of co-existing diseases, gender, and other characteristics of a population is underused. We developed a Bayesian network (BN) model as a compact representation of a VE trial dataset for use in ABS of vaccination policy. We compared BN-based VEs to the VEs estimated directly from the dataset. Our evaluation results suggest that VE trials should release statistical models of their datasets for use in ABS of vaccination policy.
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spelling pubmed-59618082018-06-08 A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy Tajgardoon, Mohammadamin Wagner, Michael M. Visweswara, Shyam Zimmerman, Richard K. AMIA Jt Summits Transl Sci Proc Articles Computer simulation is the only method available for evaluating vaccination policy for rare diseases or emergency use of new vaccines. The most realistic simulation of vaccination policy is agent-based simulation (ABS) in which agents have similar socio-demographic characteristics to a population of interest. Currently, analysts use published information about vaccine efficacy (VE) as the probability that a vaccinated agent develops immunity; however, VE trials typically report only a single overall VE, or VE conditioned on one covariate (e.g., age). Thus, ABS’s potential to realistically simulate the effects of co-existing diseases, gender, and other characteristics of a population is underused. We developed a Bayesian network (BN) model as a compact representation of a VE trial dataset for use in ABS of vaccination policy. We compared BN-based VEs to the VEs estimated directly from the dataset. Our evaluation results suggest that VE trials should release statistical models of their datasets for use in ABS of vaccination policy. American Medical Informatics Association 2018-05-18 /pmc/articles/PMC5961808/ /pubmed/29888097 Text en ©2018 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
spellingShingle Articles
Tajgardoon, Mohammadamin
Wagner, Michael M.
Visweswara, Shyam
Zimmerman, Richard K.
A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy
title A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy
title_full A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy
title_fullStr A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy
title_full_unstemmed A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy
title_short A Novel Representation of Vaccine Efficacy Trial Datasets for Use in Computer Simulation of Vaccination Policy
title_sort novel representation of vaccine efficacy trial datasets for use in computer simulation of vaccination policy
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961808/
https://www.ncbi.nlm.nih.gov/pubmed/29888097
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