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Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA

OBJECTIVES: Although different methods have been established to detect epidermal growth factor receptor (EGFR) T790M mutation in circulating tumor DNA (ctDNA), a wide range of diagnostic accuracy values were reported in previous studies. The aim of this meta-analysis was to provide pooled diagnostic...

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Autores principales: Zhang, Rui, Chen, Bojiang, Tong, Xiang, Wang, Ye, Wang, Chengdi, Jin, Jing, Tian, Panwen, Li, Weimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove Medical Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5962302/
https://www.ncbi.nlm.nih.gov/pubmed/29844700
http://dx.doi.org/10.2147/CMAR.S161382
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author Zhang, Rui
Chen, Bojiang
Tong, Xiang
Wang, Ye
Wang, Chengdi
Jin, Jing
Tian, Panwen
Li, Weimin
author_facet Zhang, Rui
Chen, Bojiang
Tong, Xiang
Wang, Ye
Wang, Chengdi
Jin, Jing
Tian, Panwen
Li, Weimin
author_sort Zhang, Rui
collection PubMed
description OBJECTIVES: Although different methods have been established to detect epidermal growth factor receptor (EGFR) T790M mutation in circulating tumor DNA (ctDNA), a wide range of diagnostic accuracy values were reported in previous studies. The aim of this meta-analysis was to provide pooled diagnostic accuracy measures for droplet digital PCR (ddPCR) in the diagnosis of EGFR T790M mutation based on ctDNA. MATERIALS AND METHODS: A systematic review and meta-analysis were carried out based on resources from Pubmed, Web of Science, Embase and Cochrane Library up to October 11, 2017. Data were extracted to assess the pooled sensitivity, specificity, positive likelihood ratio, negative likelihood ratio (NLR), diagnostic OR (DOR), and areas under the summary receiver-operating characteristic curve (SROC). RESULTS: Eleven of 311 studies identified have met the including criteria. The sensitivity and specificity of ddPCR for the detection of T790M mutation in ctDNA ranged from 0.0% to 100.0% and 63.2% to 100.0%, respectively. For the pooled analysis, ddPCR had a performance of 70.1% (95% CI, 62.7%–76.7%) sensitivity, 86.9 % (95% CI, 80.6%–91.7%) specificity, 3.67 (95% CI, 2.33–5.79) PLR, 0.41 (95% CI, 0.32–0.55) NLR, and 10.83 (95% CI, 5.86–20.03) DOR, with the area under the SROC curve being 0.82. CONCLUSION: The ddPCR harbored a good performance for detection of EGFR T790M mutation in ctDNA.
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spelling pubmed-59623022018-05-29 Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA Zhang, Rui Chen, Bojiang Tong, Xiang Wang, Ye Wang, Chengdi Jin, Jing Tian, Panwen Li, Weimin Cancer Manag Res Original Research OBJECTIVES: Although different methods have been established to detect epidermal growth factor receptor (EGFR) T790M mutation in circulating tumor DNA (ctDNA), a wide range of diagnostic accuracy values were reported in previous studies. The aim of this meta-analysis was to provide pooled diagnostic accuracy measures for droplet digital PCR (ddPCR) in the diagnosis of EGFR T790M mutation based on ctDNA. MATERIALS AND METHODS: A systematic review and meta-analysis were carried out based on resources from Pubmed, Web of Science, Embase and Cochrane Library up to October 11, 2017. Data were extracted to assess the pooled sensitivity, specificity, positive likelihood ratio, negative likelihood ratio (NLR), diagnostic OR (DOR), and areas under the summary receiver-operating characteristic curve (SROC). RESULTS: Eleven of 311 studies identified have met the including criteria. The sensitivity and specificity of ddPCR for the detection of T790M mutation in ctDNA ranged from 0.0% to 100.0% and 63.2% to 100.0%, respectively. For the pooled analysis, ddPCR had a performance of 70.1% (95% CI, 62.7%–76.7%) sensitivity, 86.9 % (95% CI, 80.6%–91.7%) specificity, 3.67 (95% CI, 2.33–5.79) PLR, 0.41 (95% CI, 0.32–0.55) NLR, and 10.83 (95% CI, 5.86–20.03) DOR, with the area under the SROC curve being 0.82. CONCLUSION: The ddPCR harbored a good performance for detection of EGFR T790M mutation in ctDNA. Dove Medical Press 2018-05-16 /pmc/articles/PMC5962302/ /pubmed/29844700 http://dx.doi.org/10.2147/CMAR.S161382 Text en © 2018 Zhang et al. This work is published and licensed by Dove Medical Press Limited The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed.
spellingShingle Original Research
Zhang, Rui
Chen, Bojiang
Tong, Xiang
Wang, Ye
Wang, Chengdi
Jin, Jing
Tian, Panwen
Li, Weimin
Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA
title Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA
title_full Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA
title_fullStr Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA
title_full_unstemmed Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA
title_short Diagnostic accuracy of droplet digital PCR for detection of EGFR T790M mutation in circulating tumor DNA
title_sort diagnostic accuracy of droplet digital pcr for detection of egfr t790m mutation in circulating tumor dna
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5962302/
https://www.ncbi.nlm.nih.gov/pubmed/29844700
http://dx.doi.org/10.2147/CMAR.S161382
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