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HLA class I alleles frequencies in the Syrian population

OBJECTIVE: The HLA system is known to be the most polymorphic genetic loci in humans. Distribution and frequencies of HLA alleles are highly variable among different human ethnic groups. The HLA system has an important role in disease susceptibility and resistance, especially in autoimmune diseases...

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Autores principales: Ikhtiar, Adnan M., Jazairi, Batoul, Khansa, Issam, Othman, Ahmad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5963146/
https://www.ncbi.nlm.nih.gov/pubmed/29784010
http://dx.doi.org/10.1186/s13104-018-3427-1
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author Ikhtiar, Adnan M.
Jazairi, Batoul
Khansa, Issam
Othman, Ahmad
author_facet Ikhtiar, Adnan M.
Jazairi, Batoul
Khansa, Issam
Othman, Ahmad
author_sort Ikhtiar, Adnan M.
collection PubMed
description OBJECTIVE: The HLA system is known to be the most polymorphic genetic loci in humans. Distribution and frequencies of HLA alleles are highly variable among different human ethnic groups. The HLA system has an important role in disease susceptibility and resistance, especially in autoimmune diseases and cancer. This study is the first report about HLA genetic variability and haplotypes among Syrians. Frequency of the HLA class I (A, B and C) alleles was determined in 105 healthy unrelated Syrian individuals from different regions in Syria. We also studied the associated haplotypes frequencies. Alleles frequencies were compared with those reported for other populations. RESULTS: Fifty-eight HLA class I alleles were observed in Syrians including 15 for HLA-A, 28 for HLA-B and 15 for HLA-C. We observed 37 HLA-A/C haplotypes, 32 B/C, and 31 A/B haplotypes. The most frequent haplotypes were A*01/C*04, A*02/C*07, A*02/B*35, and B*35/C*04. In conclusions, our preliminary study suggests a high variability in HLA class I alleles in the Syrian population. This study also gives a general reference database about the genetic pool distribution of HLA class I alleles among Syrians and can be consulted for HLA related diseases.
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spelling pubmed-59631462018-06-25 HLA class I alleles frequencies in the Syrian population Ikhtiar, Adnan M. Jazairi, Batoul Khansa, Issam Othman, Ahmad BMC Res Notes Research Note OBJECTIVE: The HLA system is known to be the most polymorphic genetic loci in humans. Distribution and frequencies of HLA alleles are highly variable among different human ethnic groups. The HLA system has an important role in disease susceptibility and resistance, especially in autoimmune diseases and cancer. This study is the first report about HLA genetic variability and haplotypes among Syrians. Frequency of the HLA class I (A, B and C) alleles was determined in 105 healthy unrelated Syrian individuals from different regions in Syria. We also studied the associated haplotypes frequencies. Alleles frequencies were compared with those reported for other populations. RESULTS: Fifty-eight HLA class I alleles were observed in Syrians including 15 for HLA-A, 28 for HLA-B and 15 for HLA-C. We observed 37 HLA-A/C haplotypes, 32 B/C, and 31 A/B haplotypes. The most frequent haplotypes were A*01/C*04, A*02/C*07, A*02/B*35, and B*35/C*04. In conclusions, our preliminary study suggests a high variability in HLA class I alleles in the Syrian population. This study also gives a general reference database about the genetic pool distribution of HLA class I alleles among Syrians and can be consulted for HLA related diseases. BioMed Central 2018-05-21 /pmc/articles/PMC5963146/ /pubmed/29784010 http://dx.doi.org/10.1186/s13104-018-3427-1 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Note
Ikhtiar, Adnan M.
Jazairi, Batoul
Khansa, Issam
Othman, Ahmad
HLA class I alleles frequencies in the Syrian population
title HLA class I alleles frequencies in the Syrian population
title_full HLA class I alleles frequencies in the Syrian population
title_fullStr HLA class I alleles frequencies in the Syrian population
title_full_unstemmed HLA class I alleles frequencies in the Syrian population
title_short HLA class I alleles frequencies in the Syrian population
title_sort hla class i alleles frequencies in the syrian population
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5963146/
https://www.ncbi.nlm.nih.gov/pubmed/29784010
http://dx.doi.org/10.1186/s13104-018-3427-1
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