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The segmentation of bones in pelvic CT images based on extraction of key frames

BACKGROUND: Bone segmentation is important in computed tomography (CT) imaging of the pelvis, which assists physicians in the early diagnosis of pelvic injury, in planning operations, and in evaluating the effects of surgical treatment. This study developed a new algorithm for the accurate, fast, an...

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Autores principales: Yu, Hui, Wang, Haijun, Shi, Yao, Xu, Ke, Yu, Xuyao, Cao, Yuzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5964913/
https://www.ncbi.nlm.nih.gov/pubmed/29788923
http://dx.doi.org/10.1186/s12880-018-0260-x
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author Yu, Hui
Wang, Haijun
Shi, Yao
Xu, Ke
Yu, Xuyao
Cao, Yuzhen
author_facet Yu, Hui
Wang, Haijun
Shi, Yao
Xu, Ke
Yu, Xuyao
Cao, Yuzhen
author_sort Yu, Hui
collection PubMed
description BACKGROUND: Bone segmentation is important in computed tomography (CT) imaging of the pelvis, which assists physicians in the early diagnosis of pelvic injury, in planning operations, and in evaluating the effects of surgical treatment. This study developed a new algorithm for the accurate, fast, and efficient segmentation of the pelvis. METHODS: The proposed method consists of two main parts: the extraction of key frames and the segmentation of pelvic CT images. Key frames were extracted based on pixel difference, mutual information and normalized correlation coefficient. In the pelvis segmentation phase, skeleton extraction from CT images and a marker-based watershed algorithm were combined to segment the pelvis. To meet the requirements of clinical application, physician’s judgment is needed. Therefore the proposed methodology is semi-automated. RESULTS: In this paper, 5 sets of CT data were used to test the overlapping area, and 15 CT images were used to determine the average deviation distance. The average overlapping area of the 5 sets was greater than 94%, and the minimum average deviation distance was approximately 0.58 pixels. In addition, the key frame extraction efficiency and the running time of the proposed method were evaluated on 20 sets of CT data. For each set, approximately 13% of the images were selected as key frames, and the average processing time was approximately 2 min (the time for manual marking was not included). CONCLUSIONS: The proposed method is able to achieve accurate, fast, and efficient segmentation of pelvic CT image sequences. Segmentation results not only provide an important reference for early diagnosis and decisions regarding surgical procedures, they also offer more accurate data for medical image registration, recognition and 3D reconstruction.
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spelling pubmed-59649132018-05-24 The segmentation of bones in pelvic CT images based on extraction of key frames Yu, Hui Wang, Haijun Shi, Yao Xu, Ke Yu, Xuyao Cao, Yuzhen BMC Med Imaging Technical Advance BACKGROUND: Bone segmentation is important in computed tomography (CT) imaging of the pelvis, which assists physicians in the early diagnosis of pelvic injury, in planning operations, and in evaluating the effects of surgical treatment. This study developed a new algorithm for the accurate, fast, and efficient segmentation of the pelvis. METHODS: The proposed method consists of two main parts: the extraction of key frames and the segmentation of pelvic CT images. Key frames were extracted based on pixel difference, mutual information and normalized correlation coefficient. In the pelvis segmentation phase, skeleton extraction from CT images and a marker-based watershed algorithm were combined to segment the pelvis. To meet the requirements of clinical application, physician’s judgment is needed. Therefore the proposed methodology is semi-automated. RESULTS: In this paper, 5 sets of CT data were used to test the overlapping area, and 15 CT images were used to determine the average deviation distance. The average overlapping area of the 5 sets was greater than 94%, and the minimum average deviation distance was approximately 0.58 pixels. In addition, the key frame extraction efficiency and the running time of the proposed method were evaluated on 20 sets of CT data. For each set, approximately 13% of the images were selected as key frames, and the average processing time was approximately 2 min (the time for manual marking was not included). CONCLUSIONS: The proposed method is able to achieve accurate, fast, and efficient segmentation of pelvic CT image sequences. Segmentation results not only provide an important reference for early diagnosis and decisions regarding surgical procedures, they also offer more accurate data for medical image registration, recognition and 3D reconstruction. BioMed Central 2018-05-22 /pmc/articles/PMC5964913/ /pubmed/29788923 http://dx.doi.org/10.1186/s12880-018-0260-x Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Technical Advance
Yu, Hui
Wang, Haijun
Shi, Yao
Xu, Ke
Yu, Xuyao
Cao, Yuzhen
The segmentation of bones in pelvic CT images based on extraction of key frames
title The segmentation of bones in pelvic CT images based on extraction of key frames
title_full The segmentation of bones in pelvic CT images based on extraction of key frames
title_fullStr The segmentation of bones in pelvic CT images based on extraction of key frames
title_full_unstemmed The segmentation of bones in pelvic CT images based on extraction of key frames
title_short The segmentation of bones in pelvic CT images based on extraction of key frames
title_sort segmentation of bones in pelvic ct images based on extraction of key frames
topic Technical Advance
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5964913/
https://www.ncbi.nlm.nih.gov/pubmed/29788923
http://dx.doi.org/10.1186/s12880-018-0260-x
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