Cargando…

The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks

Local perturbations within complex dynamical systems can trigger cascade-like events that spread across significant portions of the system. Cascades of this type have been observed across a broad range of scales in the brain. Studies of these cascades, known as neuronal avalanches, usually report th...

Descripción completa

Detalles Bibliográficos
Autores principales: Fagerholm, Erik D., Dinov, Martin, Knöpfel, Thomas, Leech, Robert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967741/
https://www.ncbi.nlm.nih.gov/pubmed/29795654
http://dx.doi.org/10.1371/journal.pone.0197893
_version_ 1783325645707673600
author Fagerholm, Erik D.
Dinov, Martin
Knöpfel, Thomas
Leech, Robert
author_facet Fagerholm, Erik D.
Dinov, Martin
Knöpfel, Thomas
Leech, Robert
author_sort Fagerholm, Erik D.
collection PubMed
description Local perturbations within complex dynamical systems can trigger cascade-like events that spread across significant portions of the system. Cascades of this type have been observed across a broad range of scales in the brain. Studies of these cascades, known as neuronal avalanches, usually report the statistics of large numbers of avalanches, without probing the characteristic patterns produced by the avalanches themselves. This is partly due to limitations in the extent or spatiotemporal resolution of commonly used neuroimaging techniques. In this study, we overcome these limitations by using optical voltage (genetically encoded voltage indicators) imaging. This allows us to record cortical activity in vivo across an entire cortical hemisphere, at both high spatial (~30um) and temporal (~20ms) resolution in mice that are either in an anesthetized or awake state. We then use artificial neural networks to identify the characteristic patterns created by neuronal avalanches in our data. The avalanches in the anesthetized cortex are most accurately classified by an artificial neural network architecture that simultaneously connects spatial and temporal information. This is in contrast with the awake cortex, in which avalanches are most accurately classified by an architecture that treats spatial and temporal information separately, due to the increased levels of spatiotemporal complexity. This is in keeping with reports of higher levels of spatiotemporal complexity in the awake brain coinciding with features of a dynamical system operating close to criticality.
format Online
Article
Text
id pubmed-5967741
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-59677412018-06-08 The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks Fagerholm, Erik D. Dinov, Martin Knöpfel, Thomas Leech, Robert PLoS One Research Article Local perturbations within complex dynamical systems can trigger cascade-like events that spread across significant portions of the system. Cascades of this type have been observed across a broad range of scales in the brain. Studies of these cascades, known as neuronal avalanches, usually report the statistics of large numbers of avalanches, without probing the characteristic patterns produced by the avalanches themselves. This is partly due to limitations in the extent or spatiotemporal resolution of commonly used neuroimaging techniques. In this study, we overcome these limitations by using optical voltage (genetically encoded voltage indicators) imaging. This allows us to record cortical activity in vivo across an entire cortical hemisphere, at both high spatial (~30um) and temporal (~20ms) resolution in mice that are either in an anesthetized or awake state. We then use artificial neural networks to identify the characteristic patterns created by neuronal avalanches in our data. The avalanches in the anesthetized cortex are most accurately classified by an artificial neural network architecture that simultaneously connects spatial and temporal information. This is in contrast with the awake cortex, in which avalanches are most accurately classified by an architecture that treats spatial and temporal information separately, due to the increased levels of spatiotemporal complexity. This is in keeping with reports of higher levels of spatiotemporal complexity in the awake brain coinciding with features of a dynamical system operating close to criticality. Public Library of Science 2018-05-24 /pmc/articles/PMC5967741/ /pubmed/29795654 http://dx.doi.org/10.1371/journal.pone.0197893 Text en © 2018 Fagerholm et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Fagerholm, Erik D.
Dinov, Martin
Knöpfel, Thomas
Leech, Robert
The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks
title The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks
title_full The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks
title_fullStr The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks
title_full_unstemmed The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks
title_short The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks
title_sort characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: an investigation using constrained artificial neural networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967741/
https://www.ncbi.nlm.nih.gov/pubmed/29795654
http://dx.doi.org/10.1371/journal.pone.0197893
work_keys_str_mv AT fagerholmerikd thecharacteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks
AT dinovmartin thecharacteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks
AT knopfelthomas thecharacteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks
AT leechrobert thecharacteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks
AT fagerholmerikd characteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks
AT dinovmartin characteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks
AT knopfelthomas characteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks
AT leechrobert characteristicpatternsofneuronalavalanchesinmiceunderanesthesiaandatrestaninvestigationusingconstrainedartificialneuralnetworks