Cargando…
Concussion classification via deep learning using whole-brain white matter fiber strains
Developing an accurate and reliable injury predictor is central to the biomechanical studies of traumatic brain injury. State-of-the-art efforts continue to rely on empirical, scalar metrics based on kinematics or model-estimated tissue responses explicitly pre-defined in a specific brain region of...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967816/ https://www.ncbi.nlm.nih.gov/pubmed/29795640 http://dx.doi.org/10.1371/journal.pone.0197992 |
_version_ | 1783325656310874112 |
---|---|
author | Cai, Yunliang Wu, Shaoju Zhao, Wei Li, Zhigang Wu, Zheyang Ji, Songbai |
author_facet | Cai, Yunliang Wu, Shaoju Zhao, Wei Li, Zhigang Wu, Zheyang Ji, Songbai |
author_sort | Cai, Yunliang |
collection | PubMed |
description | Developing an accurate and reliable injury predictor is central to the biomechanical studies of traumatic brain injury. State-of-the-art efforts continue to rely on empirical, scalar metrics based on kinematics or model-estimated tissue responses explicitly pre-defined in a specific brain region of interest. They could suffer from loss of information. A single training dataset has also been used to evaluate performance but without cross-validation. In this study, we developed a deep learning approach for concussion classification using implicit features of the entire voxel-wise white matter fiber strains. Using reconstructed American National Football League (NFL) injury cases, leave-one-out cross-validation was employed to objectively compare injury prediction performances against two baseline machine learning classifiers (support vector machine (SVM) and random forest (RF)) and four scalar metrics via univariate logistic regression (Brain Injury Criterion (BrIC), cumulative strain damage measure of the whole brain (CSDM-WB) and the corpus callosum (CSDM-CC), and peak fiber strain in the CC). Feature-based machine learning classifiers including deep learning, SVM, and RF consistently outperformed all scalar injury metrics across all performance categories (e.g., leave-one-out accuracy of 0.828–0.862 vs. 0.690–0.776, and .632+ error of 0.148–0.176 vs. 0.207–0.292). Further, deep learning achieved the best cross-validation accuracy, sensitivity, AUC, and .632+ error. These findings demonstrate the superior performances of deep learning in concussion prediction and suggest its promise for future applications in biomechanical investigations of traumatic brain injury. |
format | Online Article Text |
id | pubmed-5967816 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-59678162018-06-08 Concussion classification via deep learning using whole-brain white matter fiber strains Cai, Yunliang Wu, Shaoju Zhao, Wei Li, Zhigang Wu, Zheyang Ji, Songbai PLoS One Research Article Developing an accurate and reliable injury predictor is central to the biomechanical studies of traumatic brain injury. State-of-the-art efforts continue to rely on empirical, scalar metrics based on kinematics or model-estimated tissue responses explicitly pre-defined in a specific brain region of interest. They could suffer from loss of information. A single training dataset has also been used to evaluate performance but without cross-validation. In this study, we developed a deep learning approach for concussion classification using implicit features of the entire voxel-wise white matter fiber strains. Using reconstructed American National Football League (NFL) injury cases, leave-one-out cross-validation was employed to objectively compare injury prediction performances against two baseline machine learning classifiers (support vector machine (SVM) and random forest (RF)) and four scalar metrics via univariate logistic regression (Brain Injury Criterion (BrIC), cumulative strain damage measure of the whole brain (CSDM-WB) and the corpus callosum (CSDM-CC), and peak fiber strain in the CC). Feature-based machine learning classifiers including deep learning, SVM, and RF consistently outperformed all scalar injury metrics across all performance categories (e.g., leave-one-out accuracy of 0.828–0.862 vs. 0.690–0.776, and .632+ error of 0.148–0.176 vs. 0.207–0.292). Further, deep learning achieved the best cross-validation accuracy, sensitivity, AUC, and .632+ error. These findings demonstrate the superior performances of deep learning in concussion prediction and suggest its promise for future applications in biomechanical investigations of traumatic brain injury. Public Library of Science 2018-05-24 /pmc/articles/PMC5967816/ /pubmed/29795640 http://dx.doi.org/10.1371/journal.pone.0197992 Text en © 2018 Cai et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Cai, Yunliang Wu, Shaoju Zhao, Wei Li, Zhigang Wu, Zheyang Ji, Songbai Concussion classification via deep learning using whole-brain white matter fiber strains |
title | Concussion classification via deep learning using whole-brain white matter fiber strains |
title_full | Concussion classification via deep learning using whole-brain white matter fiber strains |
title_fullStr | Concussion classification via deep learning using whole-brain white matter fiber strains |
title_full_unstemmed | Concussion classification via deep learning using whole-brain white matter fiber strains |
title_short | Concussion classification via deep learning using whole-brain white matter fiber strains |
title_sort | concussion classification via deep learning using whole-brain white matter fiber strains |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967816/ https://www.ncbi.nlm.nih.gov/pubmed/29795640 http://dx.doi.org/10.1371/journal.pone.0197992 |
work_keys_str_mv | AT caiyunliang concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains AT wushaoju concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains AT zhaowei concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains AT lizhigang concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains AT wuzheyang concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains AT jisongbai concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains |