Cargando…

Concussion classification via deep learning using whole-brain white matter fiber strains

Developing an accurate and reliable injury predictor is central to the biomechanical studies of traumatic brain injury. State-of-the-art efforts continue to rely on empirical, scalar metrics based on kinematics or model-estimated tissue responses explicitly pre-defined in a specific brain region of...

Descripción completa

Detalles Bibliográficos
Autores principales: Cai, Yunliang, Wu, Shaoju, Zhao, Wei, Li, Zhigang, Wu, Zheyang, Ji, Songbai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967816/
https://www.ncbi.nlm.nih.gov/pubmed/29795640
http://dx.doi.org/10.1371/journal.pone.0197992
_version_ 1783325656310874112
author Cai, Yunliang
Wu, Shaoju
Zhao, Wei
Li, Zhigang
Wu, Zheyang
Ji, Songbai
author_facet Cai, Yunliang
Wu, Shaoju
Zhao, Wei
Li, Zhigang
Wu, Zheyang
Ji, Songbai
author_sort Cai, Yunliang
collection PubMed
description Developing an accurate and reliable injury predictor is central to the biomechanical studies of traumatic brain injury. State-of-the-art efforts continue to rely on empirical, scalar metrics based on kinematics or model-estimated tissue responses explicitly pre-defined in a specific brain region of interest. They could suffer from loss of information. A single training dataset has also been used to evaluate performance but without cross-validation. In this study, we developed a deep learning approach for concussion classification using implicit features of the entire voxel-wise white matter fiber strains. Using reconstructed American National Football League (NFL) injury cases, leave-one-out cross-validation was employed to objectively compare injury prediction performances against two baseline machine learning classifiers (support vector machine (SVM) and random forest (RF)) and four scalar metrics via univariate logistic regression (Brain Injury Criterion (BrIC), cumulative strain damage measure of the whole brain (CSDM-WB) and the corpus callosum (CSDM-CC), and peak fiber strain in the CC). Feature-based machine learning classifiers including deep learning, SVM, and RF consistently outperformed all scalar injury metrics across all performance categories (e.g., leave-one-out accuracy of 0.828–0.862 vs. 0.690–0.776, and .632+ error of 0.148–0.176 vs. 0.207–0.292). Further, deep learning achieved the best cross-validation accuracy, sensitivity, AUC, and .632+ error. These findings demonstrate the superior performances of deep learning in concussion prediction and suggest its promise for future applications in biomechanical investigations of traumatic brain injury.
format Online
Article
Text
id pubmed-5967816
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-59678162018-06-08 Concussion classification via deep learning using whole-brain white matter fiber strains Cai, Yunliang Wu, Shaoju Zhao, Wei Li, Zhigang Wu, Zheyang Ji, Songbai PLoS One Research Article Developing an accurate and reliable injury predictor is central to the biomechanical studies of traumatic brain injury. State-of-the-art efforts continue to rely on empirical, scalar metrics based on kinematics or model-estimated tissue responses explicitly pre-defined in a specific brain region of interest. They could suffer from loss of information. A single training dataset has also been used to evaluate performance but without cross-validation. In this study, we developed a deep learning approach for concussion classification using implicit features of the entire voxel-wise white matter fiber strains. Using reconstructed American National Football League (NFL) injury cases, leave-one-out cross-validation was employed to objectively compare injury prediction performances against two baseline machine learning classifiers (support vector machine (SVM) and random forest (RF)) and four scalar metrics via univariate logistic regression (Brain Injury Criterion (BrIC), cumulative strain damage measure of the whole brain (CSDM-WB) and the corpus callosum (CSDM-CC), and peak fiber strain in the CC). Feature-based machine learning classifiers including deep learning, SVM, and RF consistently outperformed all scalar injury metrics across all performance categories (e.g., leave-one-out accuracy of 0.828–0.862 vs. 0.690–0.776, and .632+ error of 0.148–0.176 vs. 0.207–0.292). Further, deep learning achieved the best cross-validation accuracy, sensitivity, AUC, and .632+ error. These findings demonstrate the superior performances of deep learning in concussion prediction and suggest its promise for future applications in biomechanical investigations of traumatic brain injury. Public Library of Science 2018-05-24 /pmc/articles/PMC5967816/ /pubmed/29795640 http://dx.doi.org/10.1371/journal.pone.0197992 Text en © 2018 Cai et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cai, Yunliang
Wu, Shaoju
Zhao, Wei
Li, Zhigang
Wu, Zheyang
Ji, Songbai
Concussion classification via deep learning using whole-brain white matter fiber strains
title Concussion classification via deep learning using whole-brain white matter fiber strains
title_full Concussion classification via deep learning using whole-brain white matter fiber strains
title_fullStr Concussion classification via deep learning using whole-brain white matter fiber strains
title_full_unstemmed Concussion classification via deep learning using whole-brain white matter fiber strains
title_short Concussion classification via deep learning using whole-brain white matter fiber strains
title_sort concussion classification via deep learning using whole-brain white matter fiber strains
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967816/
https://www.ncbi.nlm.nih.gov/pubmed/29795640
http://dx.doi.org/10.1371/journal.pone.0197992
work_keys_str_mv AT caiyunliang concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains
AT wushaoju concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains
AT zhaowei concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains
AT lizhigang concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains
AT wuzheyang concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains
AT jisongbai concussionclassificationviadeeplearningusingwholebrainwhitematterfiberstrains