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Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance

Clustering time series data is of great significance since it could extract meaningful statistics and other characteristics. Especially in biomedical engineering, outstanding clustering algorithms for time series may help improve the health level of people. Considering data scale and time shifts of...

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Detalles Bibliográficos
Autores principales: Liu, Yongli, Chen, Jingli, Wu, Shuai, Liu, Zhizhong, Chao, Hao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967819/
https://www.ncbi.nlm.nih.gov/pubmed/29795600
http://dx.doi.org/10.1371/journal.pone.0197499
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author Liu, Yongli
Chen, Jingli
Wu, Shuai
Liu, Zhizhong
Chao, Hao
author_facet Liu, Yongli
Chen, Jingli
Wu, Shuai
Liu, Zhizhong
Chao, Hao
author_sort Liu, Yongli
collection PubMed
description Clustering time series data is of great significance since it could extract meaningful statistics and other characteristics. Especially in biomedical engineering, outstanding clustering algorithms for time series may help improve the health level of people. Considering data scale and time shifts of time series, in this paper, we introduce two incremental fuzzy clustering algorithms based on a Dynamic Time Warping (DTW) distance. For recruiting Single-Pass and Online patterns, our algorithms could handle large-scale time series data by splitting it into a set of chunks which are processed sequentially. Besides, our algorithms select DTW to measure distance of pair-wise time series and encourage higher clustering accuracy because DTW could determine an optimal match between any two time series by stretching or compressing segments of temporal data. Our new algorithms are compared to some existing prominent incremental fuzzy clustering algorithms on 12 benchmark time series datasets. The experimental results show that the proposed approaches could yield high quality clusters and were better than all the competitors in terms of clustering accuracy.
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spelling pubmed-59678192018-06-08 Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance Liu, Yongli Chen, Jingli Wu, Shuai Liu, Zhizhong Chao, Hao PLoS One Research Article Clustering time series data is of great significance since it could extract meaningful statistics and other characteristics. Especially in biomedical engineering, outstanding clustering algorithms for time series may help improve the health level of people. Considering data scale and time shifts of time series, in this paper, we introduce two incremental fuzzy clustering algorithms based on a Dynamic Time Warping (DTW) distance. For recruiting Single-Pass and Online patterns, our algorithms could handle large-scale time series data by splitting it into a set of chunks which are processed sequentially. Besides, our algorithms select DTW to measure distance of pair-wise time series and encourage higher clustering accuracy because DTW could determine an optimal match between any two time series by stretching or compressing segments of temporal data. Our new algorithms are compared to some existing prominent incremental fuzzy clustering algorithms on 12 benchmark time series datasets. The experimental results show that the proposed approaches could yield high quality clusters and were better than all the competitors in terms of clustering accuracy. Public Library of Science 2018-05-24 /pmc/articles/PMC5967819/ /pubmed/29795600 http://dx.doi.org/10.1371/journal.pone.0197499 Text en © 2018 Liu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Liu, Yongli
Chen, Jingli
Wu, Shuai
Liu, Zhizhong
Chao, Hao
Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance
title Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance
title_full Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance
title_fullStr Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance
title_full_unstemmed Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance
title_short Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance
title_sort incremental fuzzy c medoids clustering of time series data using dynamic time warping distance
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967819/
https://www.ncbi.nlm.nih.gov/pubmed/29795600
http://dx.doi.org/10.1371/journal.pone.0197499
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