Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru

The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N(50) and L(50) values of 293 kbp and 9, respective...

Descripción completa

Detalles Bibliográficos
Autores principales: Ormeño-Orrillo, Ernesto, Aguilar-Cuba, Yohana, Zúñiga-Dávila, Doris
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5968715/
https://www.ncbi.nlm.nih.gov/pubmed/29798911
http://dx.doi.org/10.1128/genomeA.00241-18
_version_ 1783325827208839168
author Ormeño-Orrillo, Ernesto
Aguilar-Cuba, Yohana
Zúñiga-Dávila, Doris
author_facet Ormeño-Orrillo, Ernesto
Aguilar-Cuba, Yohana
Zúñiga-Dávila, Doris
author_sort Ormeño-Orrillo, Ernesto
collection PubMed
description The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N(50) and L(50) values of 293 kbp and 9, respectively. The genome contained 6,312 coding sequence (CDS) genes and 52 RNA genes (49 tRNAs and 3 rRNAs).
format Online
Article
Text
id pubmed-5968715
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-59687152018-05-30 Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru Ormeño-Orrillo, Ernesto Aguilar-Cuba, Yohana Zúñiga-Dávila, Doris Genome Announc Prokaryotes The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N(50) and L(50) values of 293 kbp and 9, respectively. The genome contained 6,312 coding sequence (CDS) genes and 52 RNA genes (49 tRNAs and 3 rRNAs). American Society for Microbiology 2018-05-24 /pmc/articles/PMC5968715/ /pubmed/29798911 http://dx.doi.org/10.1128/genomeA.00241-18 Text en Copyright © 2018 Ormeño-Orrillo et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Prokaryotes
Ormeño-Orrillo, Ernesto
Aguilar-Cuba, Yohana
Zúñiga-Dávila, Doris
Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru
title Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru
title_full Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru
title_fullStr Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru
title_full_unstemmed Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru
title_short Draft Genome Sequence of Rhizobium sophoriradicis H4, a Nitrogen-Fixing Bacterium Associated with the Leguminous Plant Phaseolus vulgaris on the Coast of Peru
title_sort draft genome sequence of rhizobium sophoriradicis h4, a nitrogen-fixing bacterium associated with the leguminous plant phaseolus vulgaris on the coast of peru
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5968715/
https://www.ncbi.nlm.nih.gov/pubmed/29798911
http://dx.doi.org/10.1128/genomeA.00241-18
work_keys_str_mv AT ormenoorrilloernesto draftgenomesequenceofrhizobiumsophoriradicish4anitrogenfixingbacteriumassociatedwiththeleguminousplantphaseolusvulgarisonthecoastofperu
AT aguilarcubayohana draftgenomesequenceofrhizobiumsophoriradicish4anitrogenfixingbacteriumassociatedwiththeleguminousplantphaseolusvulgarisonthecoastofperu
AT zunigadaviladoris draftgenomesequenceofrhizobiumsophoriradicish4anitrogenfixingbacteriumassociatedwiththeleguminousplantphaseolusvulgarisonthecoastofperu

Ejemplares similares