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Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice

Micro-computed tomography (micro-CT) is commonly used to assess bone quality and to evaluate the outcome of experimental therapies in animal models of bone diseases. Generating large datasets is however challenging and data are rarely made publicly available through shared repositories. Here we desc...

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Autores principales: Ranzoni, Anna M., Corcelli, Michelangelo, Arnett, Timothy R., Guillot, Pascale V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5972671/
https://www.ncbi.nlm.nih.gov/pubmed/29809174
http://dx.doi.org/10.1038/sdata.2018.100
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author Ranzoni, Anna M.
Corcelli, Michelangelo
Arnett, Timothy R.
Guillot, Pascale V.
author_facet Ranzoni, Anna M.
Corcelli, Michelangelo
Arnett, Timothy R.
Guillot, Pascale V.
author_sort Ranzoni, Anna M.
collection PubMed
description Micro-computed tomography (micro-CT) is commonly used to assess bone quality and to evaluate the outcome of experimental therapies in animal models of bone diseases. Generating large datasets is however challenging and data are rarely made publicly available through shared repositories. Here we describe a dataset of micro-CT reconstructed scans of the proximal part of 21 tibiae from wild-type mice, osteogenesis imperfecta mice (homozygous oim/oim) and oim/oim mice transplanted with human amniotic fluid stem cells. The dataset contains, for each sample, 991 8-bit Bitmap reconstructed images and a 3D reconstruction of the bone in the PLY format, available at the online repository Figshare. In line with the increasing effort to make scientific datasets open-access, our data can be downloaded and used by other researchers to compare their observations with ours and to directly test scientific questions on osteogenesis imperfecta bones without the need to generate complete datasets.
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spelling pubmed-59726712018-05-30 Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice Ranzoni, Anna M. Corcelli, Michelangelo Arnett, Timothy R. Guillot, Pascale V. Sci Data Data Descriptor Micro-computed tomography (micro-CT) is commonly used to assess bone quality and to evaluate the outcome of experimental therapies in animal models of bone diseases. Generating large datasets is however challenging and data are rarely made publicly available through shared repositories. Here we describe a dataset of micro-CT reconstructed scans of the proximal part of 21 tibiae from wild-type mice, osteogenesis imperfecta mice (homozygous oim/oim) and oim/oim mice transplanted with human amniotic fluid stem cells. The dataset contains, for each sample, 991 8-bit Bitmap reconstructed images and a 3D reconstruction of the bone in the PLY format, available at the online repository Figshare. In line with the increasing effort to make scientific datasets open-access, our data can be downloaded and used by other researchers to compare their observations with ours and to directly test scientific questions on osteogenesis imperfecta bones without the need to generate complete datasets. Nature Publishing Group 2018-05-29 /pmc/articles/PMC5972671/ /pubmed/29809174 http://dx.doi.org/10.1038/sdata.2018.100 Text en Copyright © 2018, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files made available in this article.
spellingShingle Data Descriptor
Ranzoni, Anna M.
Corcelli, Michelangelo
Arnett, Timothy R.
Guillot, Pascale V.
Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice
title Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice
title_full Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice
title_fullStr Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice
title_full_unstemmed Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice
title_short Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice
title_sort micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5972671/
https://www.ncbi.nlm.nih.gov/pubmed/29809174
http://dx.doi.org/10.1038/sdata.2018.100
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