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Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data

Various patterns of neural activity are observed in dynamic cortical imaging data. Such patterns may reflect how neurons communicate using the underlying circuitry to perform appropriate functions; thus it is crucial to investigate the spatiotemporal characteristics of the observed neural activity p...

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Autores principales: Song, Min, Kang, Minseok, Lee, Hyeonsu, Jeong, Yong, Paik, Se-Bum
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5974089/
https://www.ncbi.nlm.nih.gov/pubmed/29844346
http://dx.doi.org/10.1038/s41598-018-26605-z
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author Song, Min
Kang, Minseok
Lee, Hyeonsu
Jeong, Yong
Paik, Se-Bum
author_facet Song, Min
Kang, Minseok
Lee, Hyeonsu
Jeong, Yong
Paik, Se-Bum
author_sort Song, Min
collection PubMed
description Various patterns of neural activity are observed in dynamic cortical imaging data. Such patterns may reflect how neurons communicate using the underlying circuitry to perform appropriate functions; thus it is crucial to investigate the spatiotemporal characteristics of the observed neural activity patterns. In general, however, neural activities are highly nonlinear and complex, so it is a demanding job to analyze them quantitatively or to classify the patterns of observed activities in various types of imaging data. Here, we present our implementation of a novel method that successfully addresses the above issues for precise comparison and classification of neural activity patterns. Based on two-dimensional representations of the geometric structure and temporal evolution of activity patterns, our method successfully classified a number of computer-generated sample patterns created from combinations of various spatial and temporal patterns. In addition, we validated our method with voltage-sensitive dye imaging data of Alzheimer’s disease (AD) model mice. Our analysis algorithm successfully distinguished the activity data of AD mice from that of wild type with significantly higher performance than previously suggested methods. Our result provides a pragmatic solution for precise analysis of spatiotemporal patterns of neural imaging data.
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spelling pubmed-59740892018-05-31 Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data Song, Min Kang, Minseok Lee, Hyeonsu Jeong, Yong Paik, Se-Bum Sci Rep Article Various patterns of neural activity are observed in dynamic cortical imaging data. Such patterns may reflect how neurons communicate using the underlying circuitry to perform appropriate functions; thus it is crucial to investigate the spatiotemporal characteristics of the observed neural activity patterns. In general, however, neural activities are highly nonlinear and complex, so it is a demanding job to analyze them quantitatively or to classify the patterns of observed activities in various types of imaging data. Here, we present our implementation of a novel method that successfully addresses the above issues for precise comparison and classification of neural activity patterns. Based on two-dimensional representations of the geometric structure and temporal evolution of activity patterns, our method successfully classified a number of computer-generated sample patterns created from combinations of various spatial and temporal patterns. In addition, we validated our method with voltage-sensitive dye imaging data of Alzheimer’s disease (AD) model mice. Our analysis algorithm successfully distinguished the activity data of AD mice from that of wild type with significantly higher performance than previously suggested methods. Our result provides a pragmatic solution for precise analysis of spatiotemporal patterns of neural imaging data. Nature Publishing Group UK 2018-05-29 /pmc/articles/PMC5974089/ /pubmed/29844346 http://dx.doi.org/10.1038/s41598-018-26605-z Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Song, Min
Kang, Minseok
Lee, Hyeonsu
Jeong, Yong
Paik, Se-Bum
Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data
title Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data
title_full Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data
title_fullStr Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data
title_full_unstemmed Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data
title_short Classification of Spatiotemporal Neural Activity Patterns in Brain Imaging Data
title_sort classification of spatiotemporal neural activity patterns in brain imaging data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5974089/
https://www.ncbi.nlm.nih.gov/pubmed/29844346
http://dx.doi.org/10.1038/s41598-018-26605-z
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