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Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk

The β-sheet is the key structure underlying the excellent mechanical properties of spider silk. However, the comprehensive mechanism underlying β-sheet formation from soluble silk proteins during the transition into insoluble stable fibers has not been elucidated. Notably, the assembly of repetitive...

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Autores principales: Oktaviani, Nur Alia, Matsugami, Akimasa, Malay, Ali D., Hayashi, Fumiaki, Kaplan, David L., Numata, Keiji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5974136/
https://www.ncbi.nlm.nih.gov/pubmed/29844575
http://dx.doi.org/10.1038/s41467-018-04570-5
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author Oktaviani, Nur Alia
Matsugami, Akimasa
Malay, Ali D.
Hayashi, Fumiaki
Kaplan, David L.
Numata, Keiji
author_facet Oktaviani, Nur Alia
Matsugami, Akimasa
Malay, Ali D.
Hayashi, Fumiaki
Kaplan, David L.
Numata, Keiji
author_sort Oktaviani, Nur Alia
collection PubMed
description The β-sheet is the key structure underlying the excellent mechanical properties of spider silk. However, the comprehensive mechanism underlying β-sheet formation from soluble silk proteins during the transition into insoluble stable fibers has not been elucidated. Notably, the assembly of repetitive domains that dominate the length of the protein chains and structural features within the spun fibers has not been clarified. Here we determine the conformation and dynamics of the soluble precursor of the repetitive domain of spider silk using solution-state NMR, far-UV circular dichroism and vibrational circular dichroism. The soluble repetitive domain contains two major populations: ~65% random coil and ~24% polyproline type II helix (PPII helix). The PPII helix conformation in the glycine-rich region is proposed as a soluble prefibrillar region that subsequently undergoes intramolecular interactions. These findings unravel the mechanism underlying the initial step of β-sheet formation, which is an extremely rapid process during spider silk assembly.
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spelling pubmed-59741362018-05-31 Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk Oktaviani, Nur Alia Matsugami, Akimasa Malay, Ali D. Hayashi, Fumiaki Kaplan, David L. Numata, Keiji Nat Commun Article The β-sheet is the key structure underlying the excellent mechanical properties of spider silk. However, the comprehensive mechanism underlying β-sheet formation from soluble silk proteins during the transition into insoluble stable fibers has not been elucidated. Notably, the assembly of repetitive domains that dominate the length of the protein chains and structural features within the spun fibers has not been clarified. Here we determine the conformation and dynamics of the soluble precursor of the repetitive domain of spider silk using solution-state NMR, far-UV circular dichroism and vibrational circular dichroism. The soluble repetitive domain contains two major populations: ~65% random coil and ~24% polyproline type II helix (PPII helix). The PPII helix conformation in the glycine-rich region is proposed as a soluble prefibrillar region that subsequently undergoes intramolecular interactions. These findings unravel the mechanism underlying the initial step of β-sheet formation, which is an extremely rapid process during spider silk assembly. Nature Publishing Group UK 2018-05-29 /pmc/articles/PMC5974136/ /pubmed/29844575 http://dx.doi.org/10.1038/s41467-018-04570-5 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Oktaviani, Nur Alia
Matsugami, Akimasa
Malay, Ali D.
Hayashi, Fumiaki
Kaplan, David L.
Numata, Keiji
Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk
title Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk
title_full Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk
title_fullStr Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk
title_full_unstemmed Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk
title_short Conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk
title_sort conformation and dynamics of soluble repetitive domain elucidates the initial β-sheet formation of spider silk
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5974136/
https://www.ncbi.nlm.nih.gov/pubmed/29844575
http://dx.doi.org/10.1038/s41467-018-04570-5
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