Cargando…
Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism
Reactive intermediate deaminase (Rid) protein family is a recently discovered group of enzymes that is conserved in all domains of life and is proposed to play a role in the detoxification of reactive enamines/imines. UK114, the mammalian member of RidA subfamily, was identified in the early 90s as...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5979572/ https://www.ncbi.nlm.nih.gov/pubmed/29565811 http://dx.doi.org/10.3390/ijms19040945 |
_version_ | 1783327728709140480 |
---|---|
author | Degani, Genny Barbiroli, Alberto Regazzoni, Luca Popolo, Laura Vanoni, Maria Antonietta |
author_facet | Degani, Genny Barbiroli, Alberto Regazzoni, Luca Popolo, Laura Vanoni, Maria Antonietta |
author_sort | Degani, Genny |
collection | PubMed |
description | Reactive intermediate deaminase (Rid) protein family is a recently discovered group of enzymes that is conserved in all domains of life and is proposed to play a role in the detoxification of reactive enamines/imines. UK114, the mammalian member of RidA subfamily, was identified in the early 90s as a component of perchloric acid-soluble extracts from goat liver and exhibited immunomodulatory properties. Multiple activities were attributed to this protein, but its function is still unclear. This work addressed the question of whether UK114 is a Rid enzyme. Biochemical analyses demonstrated that UK114 hydrolyzes α-imino acids generated by l- or d-amino acid oxidases with a preference for those deriving from Ala > Leu = l-Met > l-Gln, whereas it was poorly active on l-Phe and l-His. Circular Dichroism (CD) analyses of UK114 conformational stability highlighted its remarkable resistance to thermal unfolding, even at high urea concentrations. The half-life of heat inactivation at 95 °C, measured from CD and activity data, was about 3.5 h. The unusual conformational stability of UK114 could be relevant in the frame of a future evaluation of its immunogenic properties. In conclusion, mammalian UK114 proteins are RidA enzymes that may play an important role in metabolism homeostasis also in these organisms. |
format | Online Article Text |
id | pubmed-5979572 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-59795722018-06-10 Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism Degani, Genny Barbiroli, Alberto Regazzoni, Luca Popolo, Laura Vanoni, Maria Antonietta Int J Mol Sci Article Reactive intermediate deaminase (Rid) protein family is a recently discovered group of enzymes that is conserved in all domains of life and is proposed to play a role in the detoxification of reactive enamines/imines. UK114, the mammalian member of RidA subfamily, was identified in the early 90s as a component of perchloric acid-soluble extracts from goat liver and exhibited immunomodulatory properties. Multiple activities were attributed to this protein, but its function is still unclear. This work addressed the question of whether UK114 is a Rid enzyme. Biochemical analyses demonstrated that UK114 hydrolyzes α-imino acids generated by l- or d-amino acid oxidases with a preference for those deriving from Ala > Leu = l-Met > l-Gln, whereas it was poorly active on l-Phe and l-His. Circular Dichroism (CD) analyses of UK114 conformational stability highlighted its remarkable resistance to thermal unfolding, even at high urea concentrations. The half-life of heat inactivation at 95 °C, measured from CD and activity data, was about 3.5 h. The unusual conformational stability of UK114 could be relevant in the frame of a future evaluation of its immunogenic properties. In conclusion, mammalian UK114 proteins are RidA enzymes that may play an important role in metabolism homeostasis also in these organisms. MDPI 2018-03-22 /pmc/articles/PMC5979572/ /pubmed/29565811 http://dx.doi.org/10.3390/ijms19040945 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Degani, Genny Barbiroli, Alberto Regazzoni, Luca Popolo, Laura Vanoni, Maria Antonietta Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism |
title | Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism |
title_full | Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism |
title_fullStr | Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism |
title_full_unstemmed | Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism |
title_short | Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism |
title_sort | imine deaminase activity and conformational stability of uk114, the mammalian member of the rid protein family active in amino acid metabolism |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5979572/ https://www.ncbi.nlm.nih.gov/pubmed/29565811 http://dx.doi.org/10.3390/ijms19040945 |
work_keys_str_mv | AT deganigenny iminedeaminaseactivityandconformationalstabilityofuk114themammalianmemberoftheridproteinfamilyactiveinaminoacidmetabolism AT barbirolialberto iminedeaminaseactivityandconformationalstabilityofuk114themammalianmemberoftheridproteinfamilyactiveinaminoacidmetabolism AT regazzoniluca iminedeaminaseactivityandconformationalstabilityofuk114themammalianmemberoftheridproteinfamilyactiveinaminoacidmetabolism AT popololaura iminedeaminaseactivityandconformationalstabilityofuk114themammalianmemberoftheridproteinfamilyactiveinaminoacidmetabolism AT vanonimariaantonietta iminedeaminaseactivityandconformationalstabilityofuk114themammalianmemberoftheridproteinfamilyactiveinaminoacidmetabolism |