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Molecular genomic landscapes of hepatobiliary cancer

Hepatocellular carcinoma (HCC) and biliary tract cancer are more frequent in East Asia including Japan than in Europe or North America. A compilation of 1340 multi‐ethnic HCC genomes, the largest cohort ever reported, identified a comprehensive landscape of HCC driver genes, comprised of three core...

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Detalles Bibliográficos
Autores principales: Shibata, Tatsuhiro, Arai, Yasuhito, Totoki, Yasushi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5980207/
https://www.ncbi.nlm.nih.gov/pubmed/29573058
http://dx.doi.org/10.1111/cas.13582
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author Shibata, Tatsuhiro
Arai, Yasuhito
Totoki, Yasushi
author_facet Shibata, Tatsuhiro
Arai, Yasuhito
Totoki, Yasushi
author_sort Shibata, Tatsuhiro
collection PubMed
description Hepatocellular carcinoma (HCC) and biliary tract cancer are more frequent in East Asia including Japan than in Europe or North America. A compilation of 1340 multi‐ethnic HCC genomes, the largest cohort ever reported, identified a comprehensive landscape of HCC driver genes, comprised of three core drivers (TP53,TERT, and WNT signaling) and combinations of infrequent alterations in various cancer pathways. In contrast, five core driver genes (TP53,ARID1A,KRAS,SMAD4, and BAP1) with characteristic molecular alterations including fusion transcripts involving fibroblast growth factor receptor 2 and the protein kinase A pathway, and IDH1/2 mutation constituted the biliary tract cancer genomes. Consistent with their heterogeneous epidemiological backgrounds, mutational signatures and combinations of non‐core driver genes within these cancer genomes were found to be complex. Integrative analyses of multi‐omics data identified molecular classifications of these tumors that are associated with clinical outcome and enrichments of potential therapeutic targets, including immune checkpoint molecules. Translating comprehensive molecular‐genomic analysis together with further basic research and international collaborations are highly anticipated for developing precise and better treatments, diagnosis, and prevention of these tumor types.
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spelling pubmed-59802072018-06-06 Molecular genomic landscapes of hepatobiliary cancer Shibata, Tatsuhiro Arai, Yasuhito Totoki, Yasushi Cancer Sci Review Articles Hepatocellular carcinoma (HCC) and biliary tract cancer are more frequent in East Asia including Japan than in Europe or North America. A compilation of 1340 multi‐ethnic HCC genomes, the largest cohort ever reported, identified a comprehensive landscape of HCC driver genes, comprised of three core drivers (TP53,TERT, and WNT signaling) and combinations of infrequent alterations in various cancer pathways. In contrast, five core driver genes (TP53,ARID1A,KRAS,SMAD4, and BAP1) with characteristic molecular alterations including fusion transcripts involving fibroblast growth factor receptor 2 and the protein kinase A pathway, and IDH1/2 mutation constituted the biliary tract cancer genomes. Consistent with their heterogeneous epidemiological backgrounds, mutational signatures and combinations of non‐core driver genes within these cancer genomes were found to be complex. Integrative analyses of multi‐omics data identified molecular classifications of these tumors that are associated with clinical outcome and enrichments of potential therapeutic targets, including immune checkpoint molecules. Translating comprehensive molecular‐genomic analysis together with further basic research and international collaborations are highly anticipated for developing precise and better treatments, diagnosis, and prevention of these tumor types. John Wiley and Sons Inc. 2018-04-28 2018-05 /pmc/articles/PMC5980207/ /pubmed/29573058 http://dx.doi.org/10.1111/cas.13582 Text en © 2018 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Review Articles
Shibata, Tatsuhiro
Arai, Yasuhito
Totoki, Yasushi
Molecular genomic landscapes of hepatobiliary cancer
title Molecular genomic landscapes of hepatobiliary cancer
title_full Molecular genomic landscapes of hepatobiliary cancer
title_fullStr Molecular genomic landscapes of hepatobiliary cancer
title_full_unstemmed Molecular genomic landscapes of hepatobiliary cancer
title_short Molecular genomic landscapes of hepatobiliary cancer
title_sort molecular genomic landscapes of hepatobiliary cancer
topic Review Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5980207/
https://www.ncbi.nlm.nih.gov/pubmed/29573058
http://dx.doi.org/10.1111/cas.13582
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