First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India

This is the first report of a Papaya ringspot virus (PRSV) isolate from the northeastern region of India. The nucleotide sequence identity of PRSV-Meghalaya was in the range of 72.6 to 82.5% with other Indian PRSV isolates, and the highest identity of 84.4% was with a French isolate. Population gene...

Descripción completa

Detalles Bibliográficos
Autores principales: Mishra, Ritesh, Patil, Basavaprabhu L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5981033/
https://www.ncbi.nlm.nih.gov/pubmed/29853500
http://dx.doi.org/10.1128/genomeA.00437-18
_version_ 1783327964060975104
author Mishra, Ritesh
Patil, Basavaprabhu L.
author_facet Mishra, Ritesh
Patil, Basavaprabhu L.
author_sort Mishra, Ritesh
collection PubMed
description This is the first report of a Papaya ringspot virus (PRSV) isolate from the northeastern region of India. The nucleotide sequence identity of PRSV-Meghalaya was in the range of 72.6 to 82.5% with other Indian PRSV isolates, and the highest identity of 84.4% was with a French isolate. Population genetic analysis indicated positive selection.
format Online
Article
Text
id pubmed-5981033
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-59810332018-06-06 First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India Mishra, Ritesh Patil, Basavaprabhu L. Genome Announc Viruses This is the first report of a Papaya ringspot virus (PRSV) isolate from the northeastern region of India. The nucleotide sequence identity of PRSV-Meghalaya was in the range of 72.6 to 82.5% with other Indian PRSV isolates, and the highest identity of 84.4% was with a French isolate. Population genetic analysis indicated positive selection. American Society for Microbiology 2018-05-31 /pmc/articles/PMC5981033/ /pubmed/29853500 http://dx.doi.org/10.1128/genomeA.00437-18 Text en Copyright © 2018 Mishra and Patil. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Viruses
Mishra, Ritesh
Patil, Basavaprabhu L.
First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India
title First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India
title_full First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India
title_fullStr First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India
title_full_unstemmed First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India
title_short First Complete Genome Sequence of a Distinct Papaya Ringspot Virus Isolate from the Northeastern Region of India
title_sort first complete genome sequence of a distinct papaya ringspot virus isolate from the northeastern region of india
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5981033/
https://www.ncbi.nlm.nih.gov/pubmed/29853500
http://dx.doi.org/10.1128/genomeA.00437-18
work_keys_str_mv AT mishraritesh firstcompletegenomesequenceofadistinctpapayaringspotvirusisolatefromthenortheasternregionofindia
AT patilbasavaprabhul firstcompletegenomesequenceofadistinctpapayaringspotvirusisolatefromthenortheasternregionofindia

Ejemplares similares