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Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.
An isolate, designated SPSPC-11(T), with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the specie...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Microbiology Society
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982127/ https://www.ncbi.nlm.nih.gov/pubmed/29458463 http://dx.doi.org/10.1099/ijsem.0.002556 |
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author | Albuquerque, Luciana Polónia, Ana Rita M. Barroso, Cristina Froufe, Hugo J. C. Lage, Olga Lobo-da-Cunha, Alexandre Egas, Conceição da Costa, Milton S. |
author_facet | Albuquerque, Luciana Polónia, Ana Rita M. Barroso, Cristina Froufe, Hugo J. C. Lage, Olga Lobo-da-Cunha, Alexandre Egas, Conceição da Costa, Milton S. |
author_sort | Albuquerque, Luciana |
collection | PubMed |
description | An isolate, designated SPSPC-11(T), with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of <85 %. The isolate was orange-pigmented, formed non-motile long filaments and rod-shaped cells that stain Gram-negative. The organism was strictly aerobic, oxidase-positive and catalase-positive. The major fatty acids were iso-C(15:0,) iso-C(15 : 0) 2-OH and iso-C(17 : 0) 3-OH. The major polar lipids were one aminophospholipid, two aminolipids and three unidentified lipids. Menaquinone 7 was the major respiratory quinone. The DNA G+C content of strain SPSPC-11(T) was 37.6 mol% (draft genome sequence). The high quality draft genome sequence corroborated many of the phenotypic characteristics of strain SPSPC-11(T). Based on genotypic, phylogenetic, physiological and biochemical characterization we describe a new species of a novel genus represented by strain SPSPC-11(T) (=CECT 9012(T)=LMG 29233(T)) for which we propose the name Raineya orbicola gen. nov., sp. nov. We also describe the family Raineyaceae to accommodate this new genus and species. |
format | Online Article Text |
id | pubmed-5982127 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Microbiology Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-59821272018-06-08 Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. Albuquerque, Luciana Polónia, Ana Rita M. Barroso, Cristina Froufe, Hugo J. C. Lage, Olga Lobo-da-Cunha, Alexandre Egas, Conceição da Costa, Milton S. Int J Syst Evol Microbiol Taxonomic Description An isolate, designated SPSPC-11(T), with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of <85 %. The isolate was orange-pigmented, formed non-motile long filaments and rod-shaped cells that stain Gram-negative. The organism was strictly aerobic, oxidase-positive and catalase-positive. The major fatty acids were iso-C(15:0,) iso-C(15 : 0) 2-OH and iso-C(17 : 0) 3-OH. The major polar lipids were one aminophospholipid, two aminolipids and three unidentified lipids. Menaquinone 7 was the major respiratory quinone. The DNA G+C content of strain SPSPC-11(T) was 37.6 mol% (draft genome sequence). The high quality draft genome sequence corroborated many of the phenotypic characteristics of strain SPSPC-11(T). Based on genotypic, phylogenetic, physiological and biochemical characterization we describe a new species of a novel genus represented by strain SPSPC-11(T) (=CECT 9012(T)=LMG 29233(T)) for which we propose the name Raineya orbicola gen. nov., sp. nov. We also describe the family Raineyaceae to accommodate this new genus and species. Microbiology Society 2018-04 2018-01-10 /pmc/articles/PMC5982127/ /pubmed/29458463 http://dx.doi.org/10.1099/ijsem.0.002556 Text en © 2018 IUMS http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Taxonomic Description Albuquerque, Luciana Polónia, Ana Rita M. Barroso, Cristina Froufe, Hugo J. C. Lage, Olga Lobo-da-Cunha, Alexandre Egas, Conceição da Costa, Milton S. Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. |
title | Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. |
title_full | Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. |
title_fullStr | Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. |
title_full_unstemmed | Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. |
title_short | Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. |
title_sort | raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum bacteroidetes and the description of raineyaceae fam. nov. |
topic | Taxonomic Description |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982127/ https://www.ncbi.nlm.nih.gov/pubmed/29458463 http://dx.doi.org/10.1099/ijsem.0.002556 |
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