Cargando…

Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.

An isolate, designated SPSPC-11(T), with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the specie...

Descripción completa

Detalles Bibliográficos
Autores principales: Albuquerque, Luciana, Polónia, Ana Rita M., Barroso, Cristina, Froufe, Hugo J. C., Lage, Olga, Lobo-da-Cunha, Alexandre, Egas, Conceição, da Costa, Milton S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982127/
https://www.ncbi.nlm.nih.gov/pubmed/29458463
http://dx.doi.org/10.1099/ijsem.0.002556
_version_ 1783328177435705344
author Albuquerque, Luciana
Polónia, Ana Rita M.
Barroso, Cristina
Froufe, Hugo J. C.
Lage, Olga
Lobo-da-Cunha, Alexandre
Egas, Conceição
da Costa, Milton S.
author_facet Albuquerque, Luciana
Polónia, Ana Rita M.
Barroso, Cristina
Froufe, Hugo J. C.
Lage, Olga
Lobo-da-Cunha, Alexandre
Egas, Conceição
da Costa, Milton S.
author_sort Albuquerque, Luciana
collection PubMed
description An isolate, designated SPSPC-11(T), with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of <85 %. The isolate was orange-pigmented, formed non-motile long filaments and rod-shaped cells that stain Gram-negative. The organism was strictly aerobic, oxidase-positive and catalase-positive. The major fatty acids were iso-C(15:0,) iso-C(15 : 0) 2-OH and iso-C(17 : 0) 3-OH. The major polar lipids were one aminophospholipid, two aminolipids and three unidentified lipids. Menaquinone 7 was the major respiratory quinone. The DNA G+C content of strain SPSPC-11(T) was 37.6 mol% (draft genome sequence). The high quality draft genome sequence corroborated many of the phenotypic characteristics of strain SPSPC-11(T). Based on genotypic, phylogenetic, physiological and biochemical characterization we describe a new species of a novel genus represented by strain SPSPC-11(T) (=CECT 9012(T)=LMG 29233(T)) for which we propose the name Raineya orbicola gen. nov., sp. nov. We also describe the family Raineyaceae to accommodate this new genus and species.
format Online
Article
Text
id pubmed-5982127
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Microbiology Society
record_format MEDLINE/PubMed
spelling pubmed-59821272018-06-08 Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov. Albuquerque, Luciana Polónia, Ana Rita M. Barroso, Cristina Froufe, Hugo J. C. Lage, Olga Lobo-da-Cunha, Alexandre Egas, Conceição da Costa, Milton S. Int J Syst Evol Microbiol Taxonomic Description An isolate, designated SPSPC-11(T), with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of <85 %. The isolate was orange-pigmented, formed non-motile long filaments and rod-shaped cells that stain Gram-negative. The organism was strictly aerobic, oxidase-positive and catalase-positive. The major fatty acids were iso-C(15:0,) iso-C(15 : 0) 2-OH and iso-C(17 : 0) 3-OH. The major polar lipids were one aminophospholipid, two aminolipids and three unidentified lipids. Menaquinone 7 was the major respiratory quinone. The DNA G+C content of strain SPSPC-11(T) was 37.6 mol% (draft genome sequence). The high quality draft genome sequence corroborated many of the phenotypic characteristics of strain SPSPC-11(T). Based on genotypic, phylogenetic, physiological and biochemical characterization we describe a new species of a novel genus represented by strain SPSPC-11(T) (=CECT 9012(T)=LMG 29233(T)) for which we propose the name Raineya orbicola gen. nov., sp. nov. We also describe the family Raineyaceae to accommodate this new genus and species. Microbiology Society 2018-04 2018-01-10 /pmc/articles/PMC5982127/ /pubmed/29458463 http://dx.doi.org/10.1099/ijsem.0.002556 Text en © 2018 IUMS http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited.
spellingShingle Taxonomic Description
Albuquerque, Luciana
Polónia, Ana Rita M.
Barroso, Cristina
Froufe, Hugo J. C.
Lage, Olga
Lobo-da-Cunha, Alexandre
Egas, Conceição
da Costa, Milton S.
Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.
title Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.
title_full Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.
title_fullStr Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.
title_full_unstemmed Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.
title_short Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov.
title_sort raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum bacteroidetes and the description of raineyaceae fam. nov.
topic Taxonomic Description
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982127/
https://www.ncbi.nlm.nih.gov/pubmed/29458463
http://dx.doi.org/10.1099/ijsem.0.002556
work_keys_str_mv AT albuquerqueluciana raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov
AT poloniaanaritam raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov
AT barrosocristina raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov
AT froufehugojc raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov
AT lageolga raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov
AT lobodacunhaalexandre raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov
AT egasconceicao raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov
AT dacostamiltons raineyaorbicolagennovspnovaslightlythermophilicbacteriumofthephylumbacteroidetesandthedescriptionofraineyaceaefamnov