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Characterization of a heat-activated retrotransposon in Vigna angularis
In plants, several transposable elements are conserved across species. We found a homolog of ONSEN, which is a heat-activated retrotransposon originally isolated from Arabidopsis thaliana, in Vigna. The ONSEN-like elements (VaONS) were detected in all the analyzed Japanese accessions of Vigna angula...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Breeding
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982181/ https://www.ncbi.nlm.nih.gov/pubmed/29875600 http://dx.doi.org/10.1270/jsbbs.17085 |
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author | Masuta, Yukari Kawabe, Akira Nozawa, Kosuke Naito, Ken Kato, Atsushi Ito, Hidetaka |
author_facet | Masuta, Yukari Kawabe, Akira Nozawa, Kosuke Naito, Ken Kato, Atsushi Ito, Hidetaka |
author_sort | Masuta, Yukari |
collection | PubMed |
description | In plants, several transposable elements are conserved across species. We found a homolog of ONSEN, which is a heat-activated retrotransposon originally isolated from Arabidopsis thaliana, in Vigna. The ONSEN-like elements (VaONS) were detected in all the analyzed Japanese accessions of Vigna angularis (adzuki bean) by Southern blot analysis. However, VaONS sequences were observed to be polymorphic in the different accessions. Interestingly, extrachromosomal DNA (ecDNA) was detected in some accessions of adzuki bean, indicating the conserved heat-activation of VaONS. Furthermore, we successfully induced retrotransposition of VaONS in adzuki plant regenerated through callus. Findings of our study should provide a new tool for molecular breeding of adzuki bean. |
format | Online Article Text |
id | pubmed-5982181 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Japanese Society of Breeding |
record_format | MEDLINE/PubMed |
spelling | pubmed-59821812018-06-06 Characterization of a heat-activated retrotransposon in Vigna angularis Masuta, Yukari Kawabe, Akira Nozawa, Kosuke Naito, Ken Kato, Atsushi Ito, Hidetaka Breed Sci Research Paper In plants, several transposable elements are conserved across species. We found a homolog of ONSEN, which is a heat-activated retrotransposon originally isolated from Arabidopsis thaliana, in Vigna. The ONSEN-like elements (VaONS) were detected in all the analyzed Japanese accessions of Vigna angularis (adzuki bean) by Southern blot analysis. However, VaONS sequences were observed to be polymorphic in the different accessions. Interestingly, extrachromosomal DNA (ecDNA) was detected in some accessions of adzuki bean, indicating the conserved heat-activation of VaONS. Furthermore, we successfully induced retrotransposition of VaONS in adzuki plant regenerated through callus. Findings of our study should provide a new tool for molecular breeding of adzuki bean. Japanese Society of Breeding 2018-03 2018-03-24 /pmc/articles/PMC5982181/ /pubmed/29875600 http://dx.doi.org/10.1270/jsbbs.17085 Text en Copyright © 2018 by JAPANESE SOCIETY OF BREEDING http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Masuta, Yukari Kawabe, Akira Nozawa, Kosuke Naito, Ken Kato, Atsushi Ito, Hidetaka Characterization of a heat-activated retrotransposon in Vigna angularis |
title | Characterization of a heat-activated retrotransposon in Vigna angularis |
title_full | Characterization of a heat-activated retrotransposon in Vigna angularis |
title_fullStr | Characterization of a heat-activated retrotransposon in Vigna angularis |
title_full_unstemmed | Characterization of a heat-activated retrotransposon in Vigna angularis |
title_short | Characterization of a heat-activated retrotransposon in Vigna angularis |
title_sort | characterization of a heat-activated retrotransposon in vigna angularis |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982181/ https://www.ncbi.nlm.nih.gov/pubmed/29875600 http://dx.doi.org/10.1270/jsbbs.17085 |
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