Cargando…

Aberration hubs in protein interaction networks highlight actionable targets in cancer

Despite efforts for extensive molecular characterization of cancer patients, such as the international cancer genome consortium (ICGC) and the cancer genome atlas (TCGA), the heterogeneous nature of cancer and our limited knowledge of the contextual function of proteins have complicated the identifi...

Descripción completa

Detalles Bibliográficos
Autores principales:	Karimzadeh, Mehran, Jandaghi, Pouria, Papadakis, Andreas I., Trainor, Sebastian, Rung, Johan, Gonzàlez-Porta, Mar, Scelo, Ghislaine, Vasudev, Naveen S., Brazma, Alvis, Huang, Sidong, Banks, Rosamonde E., Lathrop, Mark, Najafabadi, Hamed S., Riazalhosseini, Yasser
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Impact Journals LLC 2018
Materias:	Research Paper
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982744/ https://www.ncbi.nlm.nih.gov/pubmed/29861861 http://dx.doi.org/10.18632/oncotarget.25382

Ejemplares similares

Loss of chromosome Y leads to down regulation of KDM5D and KDM6C epigenetic modifiers in clear cell renal cell carcinoma
por: Arseneault, Madeleine, et al.
Publicado: (2017)

Dysregulation at multiple points of the kynurenine pathway is a ubiquitous feature of renal cancer: implications for tumour immune evasion
por: Hornigold, Nick, et al.
Publicado: (2020)

Pan-cancer analysis of mRNA stability for decoding tumour post-transcriptional programs
por: Perron, Gabrielle, et al.
Publicado: (2022)

Morphological findings in frozen non-neoplastic kidney tissues of patients with kidney cancer from large-scale multicentric studies on renal cancer
por: Abedi-Ardekani, Behnoush, et al.
Publicado: (2021)

Renal cancer biomarkers: the promise of personalized care
por: Vasudev, Naveen S, et al.
Publicado: (2012)

Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene
por: Gonzàlez-Porta, Mar, et al.
Publicado: (2013)

An Exploratory Analysis of Changes in Circulating Plasma Protein Profiles Following Image-Guided Ablation of Renal Tumours Provides Evidence for Effects on Multiple Biological Processes
por: Wah, Tze Min, et al.
Publicado: (2021)

Application of Genomic Sequencing to Refine Patient Stratification for Adjuvant Therapy in Renal Cell Carcinoma
por: Vasudev, Naveen S., et al.
Publicado: (2023)

Cell–Cell Contact Mediates Gene Expression and Fate Choice of Human Neural Stem/Progenitor Cells
por: McIntyre, William B., et al.
Publicado: (2022)

Aristolochic acid exposure in Romania and implications for renal cell carcinoma
por: Turesky, Robert J, et al.
Publicado: (2016)

Large scale comparison of global gene expression patterns in human and mouse
por: Zheng-Bradley, Xiangqun, et al.
Publicado: (2010)

A fully scalable online pre-processing algorithm for short oligonucleotide microarray atlases
por: Lahti, Leo, et al.
Publicado: (2013)

Identification of Cancer Related Genes Using a Comprehensive Map of Human Gene Expression
por: Torrente, Aurora, et al.
Publicado: (2016)

Minimum Information About a Microarray Experiment (MIAME) – Successes, Failures, Challenges
por: Brazma, Alvis
Publicado: (2009)

Rational Development of Liquid Biopsy Analysis in Renal Cell Carcinoma
por: Glennon, Kate I., et al.
Publicado: (2021)

Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
por: Greger, Liliana, et al.
Publicado: (2014)

Learning About Gene Regulatory Networks From Gene Deletion Experiments
por: Schlitt, Thomas, et al.
Publicado: (2002)

Current approaches to gene regulatory network modelling
por: Schlitt, Thomas, et al.
Publicado: (2007)

Visualization of large microarray experiments with space maps
por: Gehlenborg, Nils, et al.
Publicado: (2009)

clustComp, a bioconductor package for the comparison of clustering results
por: Torrente, Aurora, et al.
Publicado: (2017)

The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences
por: Perez-Riverol, Yasset, et al.
Publicado: (2021)

A novel atlas of gene expression in human skeletal muscle reveals molecular changes associated with aging
por: Su, Jing, et al.
Publicado: (2015)

Metadata analysis to explore hub of the hub-genes highlighting their functions, pathways and regulators for cervical cancer diagnosis and therapies
por: Reza, Md. Selim, et al.
Publicado: (2022)

C-STrap Sample Preparation Method—In-Situ Cysteinyl Peptide Capture for Bottom-Up Proteomics Analysis in the STrap Format
por: Zougman, Alexandre, et al.
Publicado: (2015)

Epigenome Aberrations: Emerging Driving Factors of the Clear Cell Renal Cell Carcinoma
por: Mehdi, Ali, et al.
Publicado: (2017)

UK Multicenter Prospective Evaluation of the Leibovich Score in Localized Renal Cell Carcinoma: Performance has Altered Over Time
por: Vasudev, Naveen S., et al.
Publicado: (2020)

RNA-Seq Gene Profiling - A Systematic Empirical Comparison
por: Fonseca, Nuno A., et al.
Publicado: (2014)

The BioStudies database
por: McEntyre, Jo, et al.
Publicado: (2015)

SAIL—a software system for sample and phenotype availability across biobanks and cohorts
por: Gostev, Mikhail, et al.
Publicado: (2011)

Do we use the appropriate controls for the identification of informative methylation markers for early cancer detection?
por: Riazalhosseini, Yasser, et al.
Publicado: (2008)

A pipeline for RNA-seq data processing and quality assessment
por: Goncalves, Angela, et al.
Publicado: (2011)

Towards reconstruction of gene networks from expression data by supervised learning
por: Soinov, Lev A, et al.
Publicado: (2003)

Contributions of transcription and mRNA decay to gene expression dynamics of fission yeast in response to oxidative stress
por: Marguerat, Samuel, et al.
Publicado: (2014)

Cellular phenotype database: a repository for systems microscopy data
por: Kirsanova, Catherine, et al.
Publicado: (2015)

Benchmarking strategies for cross-species integration of single-cell RNA sequencing data
por: Song, Yuyao, et al.
Publicado: (2023)

Meta-Data Analysis to Explore the Hub of the Hub-Genes That Influence SARS-CoV-2 Infections Highlighting Their Pathogenetic Processes and Drugs Repurposing
por: Mosharaf, Md. Parvez, et al.
Publicado: (2022)

Prediction of Gene Expression in Embryonic Structures of Drosophila melanogaster
por: Samsonova, Anastasia A, et al.
Publicado: (2007)

Blood transcriptome profile induced by an efficacious vaccine formulated with salivary antigens from cattle ticks
por: Maruyama, Sandra R., et al.
Publicado: (2019)

Probabilistic retrieval and visualization of biologically relevant microarray experiments
por: Caldas, José, et al.
Publicado: (2009)

Probabilistic retrieval and visualization of biologically relevant microarray experiments
por: Caldas, José, et al.
Publicado: (2009)

Cannot write session to /tmp/vufind_sessions/sess_77j7v71k2rj5iv3djto9mlffen