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Statistical Power for Postlicensure Medical Product Safety Data Mining
OBJECTIVE: To perform sample size calculations when using tree-based scan statistics in longitudinal observational databases. METHODS: Tree-based scan statistics enable data mining on epidemiologic datasets where thousands of disease outcomes are organized into hierarchical tree structures with auto...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ubiquity Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982804/ https://www.ncbi.nlm.nih.gov/pubmed/29881732 http://dx.doi.org/10.5334/egems.225 |
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author | Maro, Judith C. Nguyen, Michael D. Dashevsky, Inna Baker, Meghan A. Kulldorff, Martin |
author_facet | Maro, Judith C. Nguyen, Michael D. Dashevsky, Inna Baker, Meghan A. Kulldorff, Martin |
author_sort | Maro, Judith C. |
collection | PubMed |
description | OBJECTIVE: To perform sample size calculations when using tree-based scan statistics in longitudinal observational databases. METHODS: Tree-based scan statistics enable data mining on epidemiologic datasets where thousands of disease outcomes are organized into hierarchical tree structures with automatic adjustment for multiple testing. We show how to evaluate the statistical power of the unconditional and conditional Poisson versions. The null hypothesis is that there is no increase in the risk for any of the outcomes. The alternative is that one or more outcomes have an excess risk. We varied the excess risk, total sample size, frequency of the underlying event rate, and the level of across-the-board health care utilization. We also quantified the reduction in statistical power resulting from specifying a risk window that was too long or too short. RESULTS: For 500,000 exposed people, we had at least 98 percent power to detect an excess risk of 1 event per 10,000 exposed for all outcomes. In the presence of potential temporal confounding due to across-the-board elevations of health care utilization in the risk window, the conditional tree-based scan statistic controlled type I error well, while the unconditional version did not. DISCUSSION: Data mining analyses using tree-based scan statistics expand the pharmacovigilance toolbox, ensuring adequate monitoring of thousands of outcomes of interest while controlling for multiple hypothesis testing. These power evaluations enable investigators to design and optimize implementation of retrospective data mining analyses. |
format | Online Article Text |
id | pubmed-5982804 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Ubiquity Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-59828042018-06-07 Statistical Power for Postlicensure Medical Product Safety Data Mining Maro, Judith C. Nguyen, Michael D. Dashevsky, Inna Baker, Meghan A. Kulldorff, Martin EGEMS (Wash DC) Research OBJECTIVE: To perform sample size calculations when using tree-based scan statistics in longitudinal observational databases. METHODS: Tree-based scan statistics enable data mining on epidemiologic datasets where thousands of disease outcomes are organized into hierarchical tree structures with automatic adjustment for multiple testing. We show how to evaluate the statistical power of the unconditional and conditional Poisson versions. The null hypothesis is that there is no increase in the risk for any of the outcomes. The alternative is that one or more outcomes have an excess risk. We varied the excess risk, total sample size, frequency of the underlying event rate, and the level of across-the-board health care utilization. We also quantified the reduction in statistical power resulting from specifying a risk window that was too long or too short. RESULTS: For 500,000 exposed people, we had at least 98 percent power to detect an excess risk of 1 event per 10,000 exposed for all outcomes. In the presence of potential temporal confounding due to across-the-board elevations of health care utilization in the risk window, the conditional tree-based scan statistic controlled type I error well, while the unconditional version did not. DISCUSSION: Data mining analyses using tree-based scan statistics expand the pharmacovigilance toolbox, ensuring adequate monitoring of thousands of outcomes of interest while controlling for multiple hypothesis testing. These power evaluations enable investigators to design and optimize implementation of retrospective data mining analyses. Ubiquity Press 2017-06-12 /pmc/articles/PMC5982804/ /pubmed/29881732 http://dx.doi.org/10.5334/egems.225 Text en Copyright: © 2018 The Author(s) https://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported (CC BY-NC-ND 3.0), which permits unrestricted use and distribution, for non-commercial purposes, as long as the original material has not been modified, and provided the original author and source are credited. See https://creativecommons.org/licenses/by-nc-nd/3.0/. |
spellingShingle | Research Maro, Judith C. Nguyen, Michael D. Dashevsky, Inna Baker, Meghan A. Kulldorff, Martin Statistical Power for Postlicensure Medical Product Safety Data Mining |
title | Statistical Power for Postlicensure Medical Product Safety Data Mining |
title_full | Statistical Power for Postlicensure Medical Product Safety Data Mining |
title_fullStr | Statistical Power for Postlicensure Medical Product Safety Data Mining |
title_full_unstemmed | Statistical Power for Postlicensure Medical Product Safety Data Mining |
title_short | Statistical Power for Postlicensure Medical Product Safety Data Mining |
title_sort | statistical power for postlicensure medical product safety data mining |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5982804/ https://www.ncbi.nlm.nih.gov/pubmed/29881732 http://dx.doi.org/10.5334/egems.225 |
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