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Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
There is an emerging need in clinical research to accurately predict patients’ disease status and disease progression by optimally integrating multivariate clinical information. Clinical data are often collected over time for multiple biomarkers of different types (e.g. continuous, binary and counts...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985589/ https://www.ncbi.nlm.nih.gov/pubmed/27789653 http://dx.doi.org/10.1177/0962280216674496 |
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author | Hughes, David M Komárek, Arnošt Czanner, Gabriela Garcia-Fiñana, Marta |
author_facet | Hughes, David M Komárek, Arnošt Czanner, Gabriela Garcia-Fiñana, Marta |
author_sort | Hughes, David M |
collection | PubMed |
description | There is an emerging need in clinical research to accurately predict patients’ disease status and disease progression by optimally integrating multivariate clinical information. Clinical data are often collected over time for multiple biomarkers of different types (e.g. continuous, binary and counts). In this paper, we present a flexible and dynamic (time-dependent) discriminant analysis approach in which multiple biomarkers of various types are jointly modelled for classification purposes by the multivariate generalized linear mixed model. We propose a mixture of normal distributions for the random effects to allow additional flexibility when modelling the complex correlation between longitudinal biomarkers and to robustify the model and the classification procedure against misspecification of the random effects distribution. These longitudinal models are subsequently used in a multivariate time-dependent discriminant scheme to predict, at any time point, the probability of belonging to a particular risk group. The methodology is illustrated using clinical data from patients with epilepsy, where the aim is to identify patients who will not achieve remission of seizures within a five-year follow-up period. |
format | Online Article Text |
id | pubmed-5985589 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-59855892018-06-11 Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types Hughes, David M Komárek, Arnošt Czanner, Gabriela Garcia-Fiñana, Marta Stat Methods Med Res Regular Articles There is an emerging need in clinical research to accurately predict patients’ disease status and disease progression by optimally integrating multivariate clinical information. Clinical data are often collected over time for multiple biomarkers of different types (e.g. continuous, binary and counts). In this paper, we present a flexible and dynamic (time-dependent) discriminant analysis approach in which multiple biomarkers of various types are jointly modelled for classification purposes by the multivariate generalized linear mixed model. We propose a mixture of normal distributions for the random effects to allow additional flexibility when modelling the complex correlation between longitudinal biomarkers and to robustify the model and the classification procedure against misspecification of the random effects distribution. These longitudinal models are subsequently used in a multivariate time-dependent discriminant scheme to predict, at any time point, the probability of belonging to a particular risk group. The methodology is illustrated using clinical data from patients with epilepsy, where the aim is to identify patients who will not achieve remission of seizures within a five-year follow-up period. SAGE Publications 2016-10-26 2018-07 /pmc/articles/PMC5985589/ /pubmed/27789653 http://dx.doi.org/10.1177/0962280216674496 Text en © The Author(s) 2016 http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution 3.0 License (http://www.creativecommons.org/licenses/by/3.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Regular Articles Hughes, David M Komárek, Arnošt Czanner, Gabriela Garcia-Fiñana, Marta Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types |
title | Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types |
title_full | Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types |
title_fullStr | Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types |
title_full_unstemmed | Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types |
title_short | Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types |
title_sort | dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types |
topic | Regular Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985589/ https://www.ncbi.nlm.nih.gov/pubmed/27789653 http://dx.doi.org/10.1177/0962280216674496 |
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