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Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types

There is an emerging need in clinical research to accurately predict patients’ disease status and disease progression by optimally integrating multivariate clinical information. Clinical data are often collected over time for multiple biomarkers of different types (e.g. continuous, binary and counts...

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Detalles Bibliográficos
Autores principales: Hughes, David M, Komárek, Arnošt, Czanner, Gabriela, Garcia-Fiñana, Marta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985589/
https://www.ncbi.nlm.nih.gov/pubmed/27789653
http://dx.doi.org/10.1177/0962280216674496
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author Hughes, David M
Komárek, Arnošt
Czanner, Gabriela
Garcia-Fiñana, Marta
author_facet Hughes, David M
Komárek, Arnošt
Czanner, Gabriela
Garcia-Fiñana, Marta
author_sort Hughes, David M
collection PubMed
description There is an emerging need in clinical research to accurately predict patients’ disease status and disease progression by optimally integrating multivariate clinical information. Clinical data are often collected over time for multiple biomarkers of different types (e.g. continuous, binary and counts). In this paper, we present a flexible and dynamic (time-dependent) discriminant analysis approach in which multiple biomarkers of various types are jointly modelled for classification purposes by the multivariate generalized linear mixed model. We propose a mixture of normal distributions for the random effects to allow additional flexibility when modelling the complex correlation between longitudinal biomarkers and to robustify the model and the classification procedure against misspecification of the random effects distribution. These longitudinal models are subsequently used in a multivariate time-dependent discriminant scheme to predict, at any time point, the probability of belonging to a particular risk group. The methodology is illustrated using clinical data from patients with epilepsy, where the aim is to identify patients who will not achieve remission of seizures within a five-year follow-up period.
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spelling pubmed-59855892018-06-11 Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types Hughes, David M Komárek, Arnošt Czanner, Gabriela Garcia-Fiñana, Marta Stat Methods Med Res Regular Articles There is an emerging need in clinical research to accurately predict patients’ disease status and disease progression by optimally integrating multivariate clinical information. Clinical data are often collected over time for multiple biomarkers of different types (e.g. continuous, binary and counts). In this paper, we present a flexible and dynamic (time-dependent) discriminant analysis approach in which multiple biomarkers of various types are jointly modelled for classification purposes by the multivariate generalized linear mixed model. We propose a mixture of normal distributions for the random effects to allow additional flexibility when modelling the complex correlation between longitudinal biomarkers and to robustify the model and the classification procedure against misspecification of the random effects distribution. These longitudinal models are subsequently used in a multivariate time-dependent discriminant scheme to predict, at any time point, the probability of belonging to a particular risk group. The methodology is illustrated using clinical data from patients with epilepsy, where the aim is to identify patients who will not achieve remission of seizures within a five-year follow-up period. SAGE Publications 2016-10-26 2018-07 /pmc/articles/PMC5985589/ /pubmed/27789653 http://dx.doi.org/10.1177/0962280216674496 Text en © The Author(s) 2016 http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution 3.0 License (http://www.creativecommons.org/licenses/by/3.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Regular Articles
Hughes, David M
Komárek, Arnošt
Czanner, Gabriela
Garcia-Fiñana, Marta
Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
title Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
title_full Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
title_fullStr Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
title_full_unstemmed Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
title_short Dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
title_sort dynamic longitudinal discriminant analysis using multiple longitudinal markers of different types
topic Regular Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985589/
https://www.ncbi.nlm.nih.gov/pubmed/27789653
http://dx.doi.org/10.1177/0962280216674496
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