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Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load

Computational fluid dynamics (CFD) models of blood flow in the left ventricle (LV) and aorta are important tools for analyzing the mechanistic links between myocardial deformation and flow patterns. Typically, the use of image-based kinematic CFD models prevails in applications such as predicting th...

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Autores principales: Karabelas, Elias, Gsell, Matthias A. F., Augustin, Christoph M., Marx, Laura, Neic, Aurel, Prassl, Anton J., Goubergrits, Leonid, Kuehne, Titus, Plank, Gernot
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985756/
https://www.ncbi.nlm.nih.gov/pubmed/29892227
http://dx.doi.org/10.3389/fphys.2018.00538
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author Karabelas, Elias
Gsell, Matthias A. F.
Augustin, Christoph M.
Marx, Laura
Neic, Aurel
Prassl, Anton J.
Goubergrits, Leonid
Kuehne, Titus
Plank, Gernot
author_facet Karabelas, Elias
Gsell, Matthias A. F.
Augustin, Christoph M.
Marx, Laura
Neic, Aurel
Prassl, Anton J.
Goubergrits, Leonid
Kuehne, Titus
Plank, Gernot
author_sort Karabelas, Elias
collection PubMed
description Computational fluid dynamics (CFD) models of blood flow in the left ventricle (LV) and aorta are important tools for analyzing the mechanistic links between myocardial deformation and flow patterns. Typically, the use of image-based kinematic CFD models prevails in applications such as predicting the acute response to interventions which alter LV afterload conditions. However, such models are limited in their ability to analyze any impacts upon LV load or key biomarkers known to be implicated in driving remodeling processes as LV function is not accounted for in a mechanistic sense. This study addresses these limitations by reporting on progress made toward a novel electro-mechano-fluidic (EMF) model that represents the entire physics of LV electromechanics (EM) based on first principles. A biophysically detailed finite element (FE) model of LV EM was coupled with a FE-based CFD solver for moving domains using an arbitrary Eulerian-Lagrangian (ALE) formulation. Two clinical cases of patients suffering from aortic coarctations (CoA) were built and parameterized based on clinical data under pre-treatment conditions. For one patient case simulations under post-treatment conditions after geometric repair of CoA by a virtual stenting procedure were compared against pre-treatment results. Numerical stability of the approach was demonstrated by analyzing mesh quality and solver performance under the significantly large deformations of the LV blood pool. Further, computational tractability and compatibility with clinical time scales were investigated by performing strong scaling benchmarks up to 1536 compute cores. The overall cost of the entire workflow for building, fitting and executing EMF simulations was comparable to those reported for image-based kinematic models, suggesting that EMF models show potential of evolving into a viable clinical research tool.
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spelling pubmed-59857562018-06-11 Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load Karabelas, Elias Gsell, Matthias A. F. Augustin, Christoph M. Marx, Laura Neic, Aurel Prassl, Anton J. Goubergrits, Leonid Kuehne, Titus Plank, Gernot Front Physiol Physiology Computational fluid dynamics (CFD) models of blood flow in the left ventricle (LV) and aorta are important tools for analyzing the mechanistic links between myocardial deformation and flow patterns. Typically, the use of image-based kinematic CFD models prevails in applications such as predicting the acute response to interventions which alter LV afterload conditions. However, such models are limited in their ability to analyze any impacts upon LV load or key biomarkers known to be implicated in driving remodeling processes as LV function is not accounted for in a mechanistic sense. This study addresses these limitations by reporting on progress made toward a novel electro-mechano-fluidic (EMF) model that represents the entire physics of LV electromechanics (EM) based on first principles. A biophysically detailed finite element (FE) model of LV EM was coupled with a FE-based CFD solver for moving domains using an arbitrary Eulerian-Lagrangian (ALE) formulation. Two clinical cases of patients suffering from aortic coarctations (CoA) were built and parameterized based on clinical data under pre-treatment conditions. For one patient case simulations under post-treatment conditions after geometric repair of CoA by a virtual stenting procedure were compared against pre-treatment results. Numerical stability of the approach was demonstrated by analyzing mesh quality and solver performance under the significantly large deformations of the LV blood pool. Further, computational tractability and compatibility with clinical time scales were investigated by performing strong scaling benchmarks up to 1536 compute cores. The overall cost of the entire workflow for building, fitting and executing EMF simulations was comparable to those reported for image-based kinematic models, suggesting that EMF models show potential of evolving into a viable clinical research tool. Frontiers Media S.A. 2018-05-28 /pmc/articles/PMC5985756/ /pubmed/29892227 http://dx.doi.org/10.3389/fphys.2018.00538 Text en Copyright © 2018 Karabelas, Gsell, Augustin, Marx, Neic, Prassl, Goubergrits, Kuehne and Plank. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Physiology
Karabelas, Elias
Gsell, Matthias A. F.
Augustin, Christoph M.
Marx, Laura
Neic, Aurel
Prassl, Anton J.
Goubergrits, Leonid
Kuehne, Titus
Plank, Gernot
Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load
title Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load
title_full Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load
title_fullStr Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load
title_full_unstemmed Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load
title_short Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load
title_sort towards a computational framework for modeling the impact of aortic coarctations upon left ventricular load
topic Physiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985756/
https://www.ncbi.nlm.nih.gov/pubmed/29892227
http://dx.doi.org/10.3389/fphys.2018.00538
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