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Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain

Amphibacillus xylanus is a recently identified bacterium which grows well under both aerobic and anaerobic conditions and may prove useful for biomass utilization. Amphibacillus xylanus, despite lacking a respiratory chain, consumes oxygen at a similar rate to Escherichia coli (130–140 μmol oxygen·m...

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Autores principales: Kimata, Shinya, Mochizuki, Daichi, Satoh, Junichi, Kitano, Ken, Kanesaki, Yu, Takeda, Kouji, Abe, Akira, Kawasaki, Shinji, Niimura, Youichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5986008/
https://www.ncbi.nlm.nih.gov/pubmed/29928575
http://dx.doi.org/10.1002/2211-5463.12425
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author Kimata, Shinya
Mochizuki, Daichi
Satoh, Junichi
Kitano, Ken
Kanesaki, Yu
Takeda, Kouji
Abe, Akira
Kawasaki, Shinji
Niimura, Youichi
author_facet Kimata, Shinya
Mochizuki, Daichi
Satoh, Junichi
Kitano, Ken
Kanesaki, Yu
Takeda, Kouji
Abe, Akira
Kawasaki, Shinji
Niimura, Youichi
author_sort Kimata, Shinya
collection PubMed
description Amphibacillus xylanus is a recently identified bacterium which grows well under both aerobic and anaerobic conditions and may prove useful for biomass utilization. Amphibacillus xylanus, despite lacking a respiratory chain, consumes oxygen at a similar rate to Escherichia coli (130–140 μmol oxygen·min(−1)·g(−1) dry cells at 37 °C), suggesting that it has an alternative system that uses a large amount of oxygen. Amphibacillus xylanus NADH oxidase (Nox) was previously reported to rapidly reduce molecular oxygen content in the presence of exogenously added free flavin. Here, we established a quantitative method for determining the intracellular concentrations of free flavins in A. xylanus, involving French pressure and ultrafiltration membranes. The intracellular concentrations of flavin adenine dinucleotide (FAD), flavin mononucleotide (FMN), and riboflavin were estimated to be approximately 8, 3, and 1 μm, respectively. In the presence of FAD, the predominant free flavin species, two flavoproteins Nox (which binds FAD) and NAD(P)H oxidoreductase (Npo, which binds FMN), were identified as central free flavin‐associated enzymes in the oxygen metabolic pathway. Under 8 μm free FAD, the catalytic efficiency (k (cat)/K (m)) of recombinant Nox and Npo for oxygen increased by approximately fivefold and ninefold, respectively. Nox and Npo levels were increased, and intracellular FAD formation was stimulated following exposure of A. xylanus to oxygen. This suggests that these two enzymes and free FAD contribute to effective oxygen detoxification and NAD(P)(+) regeneration to maintain redox balance during aerobic growth. Furthermore, A. xylanus required iron to grow aerobically. We also discuss the contribution of the free flavin‐associated system to the process of iron utilization.
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spelling pubmed-59860082018-06-20 Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain Kimata, Shinya Mochizuki, Daichi Satoh, Junichi Kitano, Ken Kanesaki, Yu Takeda, Kouji Abe, Akira Kawasaki, Shinji Niimura, Youichi FEBS Open Bio Research Articles Amphibacillus xylanus is a recently identified bacterium which grows well under both aerobic and anaerobic conditions and may prove useful for biomass utilization. Amphibacillus xylanus, despite lacking a respiratory chain, consumes oxygen at a similar rate to Escherichia coli (130–140 μmol oxygen·min(−1)·g(−1) dry cells at 37 °C), suggesting that it has an alternative system that uses a large amount of oxygen. Amphibacillus xylanus NADH oxidase (Nox) was previously reported to rapidly reduce molecular oxygen content in the presence of exogenously added free flavin. Here, we established a quantitative method for determining the intracellular concentrations of free flavins in A. xylanus, involving French pressure and ultrafiltration membranes. The intracellular concentrations of flavin adenine dinucleotide (FAD), flavin mononucleotide (FMN), and riboflavin were estimated to be approximately 8, 3, and 1 μm, respectively. In the presence of FAD, the predominant free flavin species, two flavoproteins Nox (which binds FAD) and NAD(P)H oxidoreductase (Npo, which binds FMN), were identified as central free flavin‐associated enzymes in the oxygen metabolic pathway. Under 8 μm free FAD, the catalytic efficiency (k (cat)/K (m)) of recombinant Nox and Npo for oxygen increased by approximately fivefold and ninefold, respectively. Nox and Npo levels were increased, and intracellular FAD formation was stimulated following exposure of A. xylanus to oxygen. This suggests that these two enzymes and free FAD contribute to effective oxygen detoxification and NAD(P)(+) regeneration to maintain redox balance during aerobic growth. Furthermore, A. xylanus required iron to grow aerobically. We also discuss the contribution of the free flavin‐associated system to the process of iron utilization. John Wiley and Sons Inc. 2018-05-09 /pmc/articles/PMC5986008/ /pubmed/29928575 http://dx.doi.org/10.1002/2211-5463.12425 Text en © 2018 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Kimata, Shinya
Mochizuki, Daichi
Satoh, Junichi
Kitano, Ken
Kanesaki, Yu
Takeda, Kouji
Abe, Akira
Kawasaki, Shinji
Niimura, Youichi
Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain
title Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain
title_full Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain
title_fullStr Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain
title_full_unstemmed Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain
title_short Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain
title_sort intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in amphibacillus xylanus lacking a respiratory chain
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5986008/
https://www.ncbi.nlm.nih.gov/pubmed/29928575
http://dx.doi.org/10.1002/2211-5463.12425
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