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Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective
Brucellosis is a rarely encountered infection in Norway. The aim of this study was to explore all Brucella melitensis isolates collected in Norway from 1999 to 2016 in relation to origin of infection and antimicrobial resistance patterns. A total of 23 isolates were analysed by whole-genome sequenci...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5986768/ https://www.ncbi.nlm.nih.gov/pubmed/29867163 http://dx.doi.org/10.1038/s41598-018-26906-3 |
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author | Johansen, Tone B. Scheffer, Lonneke Jensen, Veronica K. Bohlin, Jon Feruglio, Siri L. |
author_facet | Johansen, Tone B. Scheffer, Lonneke Jensen, Veronica K. Bohlin, Jon Feruglio, Siri L. |
author_sort | Johansen, Tone B. |
collection | PubMed |
description | Brucellosis is a rarely encountered infection in Norway. The aim of this study was to explore all Brucella melitensis isolates collected in Norway from 1999 to 2016 in relation to origin of infection and antimicrobial resistance patterns. A total of 23 isolates were analysed by whole-genome sequencing and compared with selected sequences of B. melitensis available from NCBI. Additionally, SNP analysis in antibiotic resistance determining genes was performed. The majority belonged to the East Mediterranean clade (genotype II), while the remaining isolates belonged to the African clade (genotype III). These results indicate that human brucellosis in Norway is related to travels or migration from the Middle East, Asia or Africa, in accordance with results from Germany, Denmark and Sweden. Antibiotic susceptibility patterns were determined by broth microdilution method and/or gradient strip method. All isolates were susceptible for all tested antibiotics, except for rifampicin where phenotypical results indicated resistance or intermediate resistance in all isolates based on broth microdilution method, and in four isolates based on gradient strip testing. In contrast, screening of the rpoB gene did not reveal any mutations in the previously described rpoB “hot spot” regions related to rifampicin resistance, indicating overestimation of resistance based on phenotypical results. |
format | Online Article Text |
id | pubmed-5986768 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-59867682018-06-07 Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective Johansen, Tone B. Scheffer, Lonneke Jensen, Veronica K. Bohlin, Jon Feruglio, Siri L. Sci Rep Article Brucellosis is a rarely encountered infection in Norway. The aim of this study was to explore all Brucella melitensis isolates collected in Norway from 1999 to 2016 in relation to origin of infection and antimicrobial resistance patterns. A total of 23 isolates were analysed by whole-genome sequencing and compared with selected sequences of B. melitensis available from NCBI. Additionally, SNP analysis in antibiotic resistance determining genes was performed. The majority belonged to the East Mediterranean clade (genotype II), while the remaining isolates belonged to the African clade (genotype III). These results indicate that human brucellosis in Norway is related to travels or migration from the Middle East, Asia or Africa, in accordance with results from Germany, Denmark and Sweden. Antibiotic susceptibility patterns were determined by broth microdilution method and/or gradient strip method. All isolates were susceptible for all tested antibiotics, except for rifampicin where phenotypical results indicated resistance or intermediate resistance in all isolates based on broth microdilution method, and in four isolates based on gradient strip testing. In contrast, screening of the rpoB gene did not reveal any mutations in the previously described rpoB “hot spot” regions related to rifampicin resistance, indicating overestimation of resistance based on phenotypical results. Nature Publishing Group UK 2018-06-04 /pmc/articles/PMC5986768/ /pubmed/29867163 http://dx.doi.org/10.1038/s41598-018-26906-3 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Johansen, Tone B. Scheffer, Lonneke Jensen, Veronica K. Bohlin, Jon Feruglio, Siri L. Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective |
title | Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective |
title_full | Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective |
title_fullStr | Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective |
title_full_unstemmed | Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective |
title_short | Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective |
title_sort | whole-genome sequencing and antimicrobial resistance in brucella melitensis from a norwegian perspective |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5986768/ https://www.ncbi.nlm.nih.gov/pubmed/29867163 http://dx.doi.org/10.1038/s41598-018-26906-3 |
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