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Microsecond motions probed by near-rotary-resonance R(1ρ)(15)N MAS NMR experiments: the model case of protein overall-rocking in crystals
Solid-state near-rotary-resonance measurements of the spin–lattice relaxation rate in the rotating frame (R(1ρ)) is a powerful NMR technique for studying molecular dynamics in the microsecond time scale. The small difference between the spin-lock (SL) and magic-angle-spinning (MAS) frequencies allow...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5986846/ https://www.ncbi.nlm.nih.gov/pubmed/29845494 http://dx.doi.org/10.1007/s10858-018-0191-4 |
Sumario: | Solid-state near-rotary-resonance measurements of the spin–lattice relaxation rate in the rotating frame (R(1ρ)) is a powerful NMR technique for studying molecular dynamics in the microsecond time scale. The small difference between the spin-lock (SL) and magic-angle-spinning (MAS) frequencies allows sampling very slow motions, at the same time it brings up some methodological challenges. In this work, several issues affecting correct measurements and analysis of (15)N R(1ρ) data are considered in detail. Among them are signal amplitude as a function of the difference between SL and MAS frequencies, “dead time” in the initial part of the relaxation decay caused by transient spin-dynamic oscillations, measurements under HORROR condition and proper treatment of the multi-exponential relaxation decays. The multiple (15)N R(1ρ) measurements at different SL fields and temperatures have been conducted in 1D mode (i.e. without site-specific resolution) for a set of four different microcrystalline protein samples (GB1, SH3, MPD-ubiquitin and cubic-PEG-ubiquitin) to study the overall protein rocking in a crystal. While the amplitude of this motion varies very significantly, its correlation time for all four sample is practically the same, 30–50 μs. The amplitude of the rocking motion correlates with the packing density of a protein crystal. It has been suggested that the rocking motion is not diffusive but likely a jump-like dynamic process. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10858-018-0191-4) contains supplementary material, which is available to authorized users. |
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