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Towards a functional definition of the mitochondrial human proteome
The mitochondrial human proteome project (mt-HPP) was initiated by the Italian HPP group as a part of both the chromosome-centric initiative (C-HPP) and the biology and disease driven initiative (B/D-HPP). In recent years several reports highlighted how mitochondrial biology and disease are regula...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988588/ https://www.ncbi.nlm.nih.gov/pubmed/29900096 http://dx.doi.org/10.1016/j.euprot.2016.01.004 |
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author | Fasano, Mauro Alberio, Tiziana Babu, Mohan Lundberg, Emma Urbani, Andrea |
author_facet | Fasano, Mauro Alberio, Tiziana Babu, Mohan Lundberg, Emma Urbani, Andrea |
author_sort | Fasano, Mauro |
collection | PubMed |
description | The mitochondrial human proteome project (mt-HPP) was initiated by the Italian HPP group as a part of both the chromosome-centric initiative (C-HPP) and the biology and disease driven initiative (B/D-HPP). In recent years several reports highlighted how mitochondrial biology and disease are regulated by specific interactions with non-mitochondrial proteins. Thus, it is of great relevance to extend our present view of the mitochondrial proteome not only to those proteins that are encoded by or transported to mitochondria, but also to their interactors that take part in mitochondria functionality. Here, we propose a graphical representation of the functional mitochondrial proteome by retrieving mitochondrial proteins from the NeXtProt database and adding to the network their interactors as annotated in the IntAct database. Notably, the network may represent a reference to map all the proteins that are currently being identified in mitochondrial proteomics studies. |
format | Online Article Text |
id | pubmed-5988588 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-59885882018-06-13 Towards a functional definition of the mitochondrial human proteome Fasano, Mauro Alberio, Tiziana Babu, Mohan Lundberg, Emma Urbani, Andrea EuPA Open Proteom Special Section: Proceedings of the 9th Annual EuPA Congress “Proteomics - Back to the Future” (June 23 - 28, 2015, Milano, Italy) The mitochondrial human proteome project (mt-HPP) was initiated by the Italian HPP group as a part of both the chromosome-centric initiative (C-HPP) and the biology and disease driven initiative (B/D-HPP). In recent years several reports highlighted how mitochondrial biology and disease are regulated by specific interactions with non-mitochondrial proteins. Thus, it is of great relevance to extend our present view of the mitochondrial proteome not only to those proteins that are encoded by or transported to mitochondria, but also to their interactors that take part in mitochondria functionality. Here, we propose a graphical representation of the functional mitochondrial proteome by retrieving mitochondrial proteins from the NeXtProt database and adding to the network their interactors as annotated in the IntAct database. Notably, the network may represent a reference to map all the proteins that are currently being identified in mitochondrial proteomics studies. Elsevier 2016-01-07 /pmc/articles/PMC5988588/ /pubmed/29900096 http://dx.doi.org/10.1016/j.euprot.2016.01.004 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Special Section: Proceedings of the 9th Annual EuPA Congress “Proteomics - Back to the Future” (June 23 - 28, 2015, Milano, Italy) Fasano, Mauro Alberio, Tiziana Babu, Mohan Lundberg, Emma Urbani, Andrea Towards a functional definition of the mitochondrial human proteome |
title | Towards a functional definition of the mitochondrial human proteome |
title_full | Towards a functional definition of the mitochondrial human proteome |
title_fullStr | Towards a functional definition of the mitochondrial human proteome |
title_full_unstemmed | Towards a functional definition of the mitochondrial human proteome |
title_short | Towards a functional definition of the mitochondrial human proteome |
title_sort | towards a functional definition of the mitochondrial human proteome |
topic | Special Section: Proceedings of the 9th Annual EuPA Congress “Proteomics - Back to the Future” (June 23 - 28, 2015, Milano, Italy) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988588/ https://www.ncbi.nlm.nih.gov/pubmed/29900096 http://dx.doi.org/10.1016/j.euprot.2016.01.004 |
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