Cargando…

Towards a functional definition of the mitochondrial human proteome

The mitochondrial human proteome project (mt-HPP) was initiated by the Italian HPP group as a part of both the chromosome-centric initiative (C-HPP) and the ⿿biology and disease driven⿿ initiative (B/D-HPP). In recent years several reports highlighted how mitochondrial biology and disease are regula...

Descripción completa

Detalles Bibliográficos
Autores principales: Fasano, Mauro, Alberio, Tiziana, Babu, Mohan, Lundberg, Emma, Urbani, Andrea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988588/
https://www.ncbi.nlm.nih.gov/pubmed/29900096
http://dx.doi.org/10.1016/j.euprot.2016.01.004
_version_ 1783329309958602752
author Fasano, Mauro
Alberio, Tiziana
Babu, Mohan
Lundberg, Emma
Urbani, Andrea
author_facet Fasano, Mauro
Alberio, Tiziana
Babu, Mohan
Lundberg, Emma
Urbani, Andrea
author_sort Fasano, Mauro
collection PubMed
description The mitochondrial human proteome project (mt-HPP) was initiated by the Italian HPP group as a part of both the chromosome-centric initiative (C-HPP) and the ⿿biology and disease driven⿿ initiative (B/D-HPP). In recent years several reports highlighted how mitochondrial biology and disease are regulated by specific interactions with non-mitochondrial proteins. Thus, it is of great relevance to extend our present view of the mitochondrial proteome not only to those proteins that are encoded by or transported to mitochondria, but also to their interactors that take part in mitochondria functionality. Here, we propose a graphical representation of the functional mitochondrial proteome by retrieving mitochondrial proteins from the NeXtProt database and adding to the network their interactors as annotated in the IntAct database. Notably, the network may represent a reference to map all the proteins that are currently being identified in mitochondrial proteomics studies.
format Online
Article
Text
id pubmed-5988588
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-59885882018-06-13 Towards a functional definition of the mitochondrial human proteome Fasano, Mauro Alberio, Tiziana Babu, Mohan Lundberg, Emma Urbani, Andrea EuPA Open Proteom Special Section: Proceedings of the 9th Annual EuPA Congress “Proteomics - Back to the Future” (June 23 - 28, 2015, Milano, Italy) The mitochondrial human proteome project (mt-HPP) was initiated by the Italian HPP group as a part of both the chromosome-centric initiative (C-HPP) and the ⿿biology and disease driven⿿ initiative (B/D-HPP). In recent years several reports highlighted how mitochondrial biology and disease are regulated by specific interactions with non-mitochondrial proteins. Thus, it is of great relevance to extend our present view of the mitochondrial proteome not only to those proteins that are encoded by or transported to mitochondria, but also to their interactors that take part in mitochondria functionality. Here, we propose a graphical representation of the functional mitochondrial proteome by retrieving mitochondrial proteins from the NeXtProt database and adding to the network their interactors as annotated in the IntAct database. Notably, the network may represent a reference to map all the proteins that are currently being identified in mitochondrial proteomics studies. Elsevier 2016-01-07 /pmc/articles/PMC5988588/ /pubmed/29900096 http://dx.doi.org/10.1016/j.euprot.2016.01.004 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Special Section: Proceedings of the 9th Annual EuPA Congress “Proteomics - Back to the Future” (June 23 - 28, 2015, Milano, Italy)
Fasano, Mauro
Alberio, Tiziana
Babu, Mohan
Lundberg, Emma
Urbani, Andrea
Towards a functional definition of the mitochondrial human proteome
title Towards a functional definition of the mitochondrial human proteome
title_full Towards a functional definition of the mitochondrial human proteome
title_fullStr Towards a functional definition of the mitochondrial human proteome
title_full_unstemmed Towards a functional definition of the mitochondrial human proteome
title_short Towards a functional definition of the mitochondrial human proteome
title_sort towards a functional definition of the mitochondrial human proteome
topic Special Section: Proceedings of the 9th Annual EuPA Congress “Proteomics - Back to the Future” (June 23 - 28, 2015, Milano, Italy)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988588/
https://www.ncbi.nlm.nih.gov/pubmed/29900096
http://dx.doi.org/10.1016/j.euprot.2016.01.004
work_keys_str_mv AT fasanomauro towardsafunctionaldefinitionofthemitochondrialhumanproteome
AT alberiotiziana towardsafunctionaldefinitionofthemitochondrialhumanproteome
AT babumohan towardsafunctionaldefinitionofthemitochondrialhumanproteome
AT lundbergemma towardsafunctionaldefinitionofthemitochondrialhumanproteome
AT urbaniandrea towardsafunctionaldefinitionofthemitochondrialhumanproteome