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A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis

The Disc Agarose Channel (DAC) system utilizes microfluidics and imaging technologies and is fully automated and capable of tracking single cell growth to produce Mycobacterium tuberculosis (MTB) drug susceptibility testing (DST) results within 3~7 days. In particular, this system can be easily used...

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Autores principales: Jung, Yong-Gyun, Kim, Hyejin, Lee, Sangyeop, Kim, Suyeoun, Jo, EunJi, Kim, Eun-Geun, Choi, Jungil, Kim, Hyun Jung, Yoo, Jungheon, Lee, Hye-Jeong, Kim, Haeun, Jung, Hyunju, Ryoo, Sungweon, Kwon, Sunghoon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988837/
https://www.ncbi.nlm.nih.gov/pubmed/29872060
http://dx.doi.org/10.1038/s41598-018-26419-z
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author Jung, Yong-Gyun
Kim, Hyejin
Lee, Sangyeop
Kim, Suyeoun
Jo, EunJi
Kim, Eun-Geun
Choi, Jungil
Kim, Hyun Jung
Yoo, Jungheon
Lee, Hye-Jeong
Kim, Haeun
Jung, Hyunju
Ryoo, Sungweon
Kwon, Sunghoon
author_facet Jung, Yong-Gyun
Kim, Hyejin
Lee, Sangyeop
Kim, Suyeoun
Jo, EunJi
Kim, Eun-Geun
Choi, Jungil
Kim, Hyun Jung
Yoo, Jungheon
Lee, Hye-Jeong
Kim, Haeun
Jung, Hyunju
Ryoo, Sungweon
Kwon, Sunghoon
author_sort Jung, Yong-Gyun
collection PubMed
description The Disc Agarose Channel (DAC) system utilizes microfluidics and imaging technologies and is fully automated and capable of tracking single cell growth to produce Mycobacterium tuberculosis (MTB) drug susceptibility testing (DST) results within 3~7 days. In particular, this system can be easily used to perform DSTs without the fastidious preparation of the inoculum of MTB cells. Inoculum effect is one of the major problems that causes DST errors. The DAC system was not influenced by the inoculum effect and produced reliable DST results. In this system, the minimum inhibitory concentration (MIC) values of the first-line drugs were consistent regardless of inoculum sizes ranging from ~10(3) to ~10(8) CFU/mL. The consistent MIC results enabled us to determine the critical concentrations for 12 anti-tuberculosis drugs. Based on the determined critical concentrations, further DSTs were performed with 254 MTB clinical isolates without measuring an inoculum size. There were high agreement rates (96.3%) between the DAC system and the absolute concentration method using Löwenstein-Jensen medium. According to these results, the DAC system is the first DST system that is not affected by the inoculum effect. It can thus increase reliability and convenience for DST of MTB. We expect that this system will be a potential substitute for conventional DST systems.
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spelling pubmed-59888372018-06-20 A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis Jung, Yong-Gyun Kim, Hyejin Lee, Sangyeop Kim, Suyeoun Jo, EunJi Kim, Eun-Geun Choi, Jungil Kim, Hyun Jung Yoo, Jungheon Lee, Hye-Jeong Kim, Haeun Jung, Hyunju Ryoo, Sungweon Kwon, Sunghoon Sci Rep Article The Disc Agarose Channel (DAC) system utilizes microfluidics and imaging technologies and is fully automated and capable of tracking single cell growth to produce Mycobacterium tuberculosis (MTB) drug susceptibility testing (DST) results within 3~7 days. In particular, this system can be easily used to perform DSTs without the fastidious preparation of the inoculum of MTB cells. Inoculum effect is one of the major problems that causes DST errors. The DAC system was not influenced by the inoculum effect and produced reliable DST results. In this system, the minimum inhibitory concentration (MIC) values of the first-line drugs were consistent regardless of inoculum sizes ranging from ~10(3) to ~10(8) CFU/mL. The consistent MIC results enabled us to determine the critical concentrations for 12 anti-tuberculosis drugs. Based on the determined critical concentrations, further DSTs were performed with 254 MTB clinical isolates without measuring an inoculum size. There were high agreement rates (96.3%) between the DAC system and the absolute concentration method using Löwenstein-Jensen medium. According to these results, the DAC system is the first DST system that is not affected by the inoculum effect. It can thus increase reliability and convenience for DST of MTB. We expect that this system will be a potential substitute for conventional DST systems. Nature Publishing Group UK 2018-06-05 /pmc/articles/PMC5988837/ /pubmed/29872060 http://dx.doi.org/10.1038/s41598-018-26419-z Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Jung, Yong-Gyun
Kim, Hyejin
Lee, Sangyeop
Kim, Suyeoun
Jo, EunJi
Kim, Eun-Geun
Choi, Jungil
Kim, Hyun Jung
Yoo, Jungheon
Lee, Hye-Jeong
Kim, Haeun
Jung, Hyunju
Ryoo, Sungweon
Kwon, Sunghoon
A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis
title A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis
title_full A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis
title_fullStr A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis
title_full_unstemmed A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis
title_short A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis
title_sort rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of mycobacterium tuberculosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988837/
https://www.ncbi.nlm.nih.gov/pubmed/29872060
http://dx.doi.org/10.1038/s41598-018-26419-z
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