Cargando…
A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis
The Disc Agarose Channel (DAC) system utilizes microfluidics and imaging technologies and is fully automated and capable of tracking single cell growth to produce Mycobacterium tuberculosis (MTB) drug susceptibility testing (DST) results within 3~7 days. In particular, this system can be easily used...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988837/ https://www.ncbi.nlm.nih.gov/pubmed/29872060 http://dx.doi.org/10.1038/s41598-018-26419-z |
_version_ | 1783329359531081728 |
---|---|
author | Jung, Yong-Gyun Kim, Hyejin Lee, Sangyeop Kim, Suyeoun Jo, EunJi Kim, Eun-Geun Choi, Jungil Kim, Hyun Jung Yoo, Jungheon Lee, Hye-Jeong Kim, Haeun Jung, Hyunju Ryoo, Sungweon Kwon, Sunghoon |
author_facet | Jung, Yong-Gyun Kim, Hyejin Lee, Sangyeop Kim, Suyeoun Jo, EunJi Kim, Eun-Geun Choi, Jungil Kim, Hyun Jung Yoo, Jungheon Lee, Hye-Jeong Kim, Haeun Jung, Hyunju Ryoo, Sungweon Kwon, Sunghoon |
author_sort | Jung, Yong-Gyun |
collection | PubMed |
description | The Disc Agarose Channel (DAC) system utilizes microfluidics and imaging technologies and is fully automated and capable of tracking single cell growth to produce Mycobacterium tuberculosis (MTB) drug susceptibility testing (DST) results within 3~7 days. In particular, this system can be easily used to perform DSTs without the fastidious preparation of the inoculum of MTB cells. Inoculum effect is one of the major problems that causes DST errors. The DAC system was not influenced by the inoculum effect and produced reliable DST results. In this system, the minimum inhibitory concentration (MIC) values of the first-line drugs were consistent regardless of inoculum sizes ranging from ~10(3) to ~10(8) CFU/mL. The consistent MIC results enabled us to determine the critical concentrations for 12 anti-tuberculosis drugs. Based on the determined critical concentrations, further DSTs were performed with 254 MTB clinical isolates without measuring an inoculum size. There were high agreement rates (96.3%) between the DAC system and the absolute concentration method using Löwenstein-Jensen medium. According to these results, the DAC system is the first DST system that is not affected by the inoculum effect. It can thus increase reliability and convenience for DST of MTB. We expect that this system will be a potential substitute for conventional DST systems. |
format | Online Article Text |
id | pubmed-5988837 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-59888372018-06-20 A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis Jung, Yong-Gyun Kim, Hyejin Lee, Sangyeop Kim, Suyeoun Jo, EunJi Kim, Eun-Geun Choi, Jungil Kim, Hyun Jung Yoo, Jungheon Lee, Hye-Jeong Kim, Haeun Jung, Hyunju Ryoo, Sungweon Kwon, Sunghoon Sci Rep Article The Disc Agarose Channel (DAC) system utilizes microfluidics and imaging technologies and is fully automated and capable of tracking single cell growth to produce Mycobacterium tuberculosis (MTB) drug susceptibility testing (DST) results within 3~7 days. In particular, this system can be easily used to perform DSTs without the fastidious preparation of the inoculum of MTB cells. Inoculum effect is one of the major problems that causes DST errors. The DAC system was not influenced by the inoculum effect and produced reliable DST results. In this system, the minimum inhibitory concentration (MIC) values of the first-line drugs were consistent regardless of inoculum sizes ranging from ~10(3) to ~10(8) CFU/mL. The consistent MIC results enabled us to determine the critical concentrations for 12 anti-tuberculosis drugs. Based on the determined critical concentrations, further DSTs were performed with 254 MTB clinical isolates without measuring an inoculum size. There were high agreement rates (96.3%) between the DAC system and the absolute concentration method using Löwenstein-Jensen medium. According to these results, the DAC system is the first DST system that is not affected by the inoculum effect. It can thus increase reliability and convenience for DST of MTB. We expect that this system will be a potential substitute for conventional DST systems. Nature Publishing Group UK 2018-06-05 /pmc/articles/PMC5988837/ /pubmed/29872060 http://dx.doi.org/10.1038/s41598-018-26419-z Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Jung, Yong-Gyun Kim, Hyejin Lee, Sangyeop Kim, Suyeoun Jo, EunJi Kim, Eun-Geun Choi, Jungil Kim, Hyun Jung Yoo, Jungheon Lee, Hye-Jeong Kim, Haeun Jung, Hyunju Ryoo, Sungweon Kwon, Sunghoon A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis |
title | A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis |
title_full | A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis |
title_fullStr | A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis |
title_full_unstemmed | A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis |
title_short | A rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of Mycobacterium tuberculosis |
title_sort | rapid culture system uninfluenced by an inoculum effect increases reliability and convenience for drug susceptibility testing of mycobacterium tuberculosis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988837/ https://www.ncbi.nlm.nih.gov/pubmed/29872060 http://dx.doi.org/10.1038/s41598-018-26419-z |
work_keys_str_mv | AT jungyonggyun arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimhyejin arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT leesangyeop arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimsuyeoun arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT joeunji arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimeungeun arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT choijungil arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimhyunjung arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT yoojungheon arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT leehyejeong arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimhaeun arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT junghyunju arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT ryoosungweon arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kwonsunghoon arapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT jungyonggyun rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimhyejin rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT leesangyeop rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimsuyeoun rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT joeunji rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimeungeun rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT choijungil rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimhyunjung rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT yoojungheon rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT leehyejeong rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kimhaeun rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT junghyunju rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT ryoosungweon rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis AT kwonsunghoon rapidculturesystemuninfluencedbyaninoculumeffectincreasesreliabilityandconveniencefordrugsusceptibilitytestingofmycobacteriumtuberculosis |